RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 GIT2Q14161 759 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 TPD52L1Q16890 204 aaPredicted RBP15.13■□□□□ 0.01
CDC42-202ENST00000344548 VSIG10LQ86VR7 867 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 BANK1Q8NDB2 785 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 P2RX5Q93086 422 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 ASCC2Q9H1I8 757 aaPredicted RBP15.13■□□□□ 0.01
CDC42-202ENST00000344548 TXNRD2Q9NNW7 524 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 DNM3Q9UQ16 869 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 TESPA1A2RU30 521 aaPredicted RBP15.13■□□□□ 0.01
CDC42-202ENST00000344548 IQCA1LA6NCM1 817 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 PSMA7O14818 248 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 NR3C2P08235 984 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
CDC42-202ENST00000344548 CASP5P51878 434 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 LDLRAD1Q5T700 205 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 REEP2Q9BRK0 252 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 TEKT3Q9BXF9 490 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 VPS16Q9H269 839 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 ACAD9Q9H845 621 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 TAB2Q9NYJ8 693 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 KCNH4Q9UQ05 1017 aa15.13■□□□□ 0.01
CDC42-202ENST00000344548 LOC285556D6RIA3 1793 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 MYPNQ86TC9 1320 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 ZC3H4Q9UPT8 1303 aaKnown RBP15.12■□□□□ 0.01
CDC42-202ENST00000344548 CNMDO75829 334 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 CCNE1P24864 410 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 TCP11X2Q5H9J9 407 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 CEP135Q66GS9 1140 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 DHTKD1Q96HY7 919 aaPredicted RBP15.12■□□□□ 0.01
CDC42-202ENST00000344548 TRIM47Q96LD4 638 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 RIT2Q99578 217 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 SFI1A8K8P3 1242 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 KCNJ18B7U540 433 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 CXCL11O14625 94 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 CBFA2T2O43439 604 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 CCNE2O96020 404 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 KCNJ12Q14500 433 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 Q3C1V9 767 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 CENPPQ6IPU0 288 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 GPAT2Q6NUI2 795 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 SH2D3AQ9BRG2 576 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 PAGR1Q9BTK6 254 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 ZHX3Q9H4I2 956 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 LIMA1Q9UHB6 759 aaKnown RBP15.12■□□□□ 0.01
CDC42-202ENST00000344548 RABGAP1Q9Y3P9 1069 aa15.12■□□□□ 0.01
CDC42-202ENST00000344548 FRMD3A2A2Y4 597 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 LRRC10BA6NIK2 292 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 EYA4O95677 639 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 PBX1P40424 430 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 TBX2Q13207 712 aaPredicted RBP15.11■□□□□ 0.01
CDC42-202ENST00000344548 RINT1Q6NUQ1 792 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 NIPA1Q7RTP0 329 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 PNMA8AQ86V59 439 aaPredicted RBP15.11■□□□□ 0.01
CDC42-202ENST00000344548 CSGALNACT2Q8N6G5 542 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 SAMD3Q8N6K7 520 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 PROCA1Q8NCQ7 364 aaPredicted RBP15.11■□□□□ 0.01
CDC42-202ENST00000344548 CCDC47Q96A33 483 aaKnown RBP15.11■□□□□ 0.01
CDC42-202ENST00000344548 LXNQ9BS40 222 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 TUFT1Q9NNX1 390 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 IMPACTQ9P2X3 320 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 A0A0G2JMZ2 1700 aa15.11■□□□□ 0.01
CDC42-202ENST00000344548 TMEM150BA6NC51 233 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 SLC26A4O43511 780 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 SORBS3O60504 671 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 TPM3P06753 285 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 HERVK_113P62684 666 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 PPIL2Q13356 520 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 STIM1Q13586 685 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 EPHA7Q15375 998 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 COBLL1Q53SF7 1204 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 HERC4Q5GLZ8 1057 aaPredicted RBP15.1■□□□□ 0.01
CDC42-202ENST00000344548 FAM26FQ5R3K3 315 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 RBPJLQ9UBG7 517 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 PNMA2Q9UL42 364 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 ERCC3P19447 782 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 COPB1P53618 953 aaKnown RBP15.1■□□□□ 0.01
CDC42-202ENST00000344548 MKRN3Q13064 507 aaKnown RBP15.1■□□□□ 0.01
CDC42-202ENST00000344548 NOLC1Q14978 699 aaKnown RBP eCLIP15.1■□□□□ 0.013e-7■□□□□ 8.7
CDC42-202ENST00000344548 UGCGQ16739 394 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 TRMT1LQ7Z2T5 733 aaKnown RBP15.1■□□□□ 0.01
CDC42-202ENST00000344548 GUF1Q8N442 669 aaKnown RBP15.1■□□□□ 0.01
CDC42-202ENST00000344548 LRRC27Q9C0I9 530 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 SPATC1LQ9H0A9 340 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 AGTPBP1Q9UPW5 1226 aa15.1■□□□□ 0.01
CDC42-202ENST00000344548 KIAA1217Q5T5P2 1943 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 SKILP12757 684 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 IRX3P78415 501 aaPredicted RBP15.09■□□□□ 0.01
CDC42-202ENST00000344548 ARMC9Q7Z3E5 817 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 SFR1Q86XK3 245 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 NELFCDQ8IXH7 590 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 NSUN6Q8TEA1 469 aaKnown RBP15.09■□□□□ 0.01
CDC42-202ENST00000344548 SCFD1Q8WVM8 642 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 INPP4AQ96PE3 977 aaPredicted RBP15.09■□□□□ 0.01
CDC42-202ENST00000344548 MOV10L1Q9BXT6 1211 aaKnown RBP15.09■□□□□ 0.01
CDC42-202ENST00000344548 IKZF4Q9H2S9 585 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
CDC42-202ENST00000344548 DOCK5Q9H7D0 1870 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 PCNTO95613 3336 aa15.09■□□□□ 0.01
CDC42-202ENST00000344548 RNF225M0QZC1 329 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms