RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 CCT8L1PA6NM43 557 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 AHCYL1O43865 530 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 HSPA9P38646 679 aaKnown RBP16.85■□□□□ 0.29
LIMK2-203ENST00000340552 BLMHQ13867 455 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 MFSD14BQ5SR56 506 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 CPLX4Q7Z7G2 160 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 TBC1D1Q86TI0 1168 aaPredicted RBP16.85■□□□□ 0.29
LIMK2-203ENST00000340552 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 FOXP1Q9H334 677 aaPredicted RBP16.85■□□□□ 0.29
LIMK2-203ENST00000340552 PLCB1Q9NQ66 1216 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 ZNHIT6Q9NWK9 470 aaKnown RBP16.85■□□□□ 0.29
LIMK2-203ENST00000340552 CEP131Q9UPN4 1083 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 PCDHGC5Q9Y5F6 944 aa16.85■□□□□ 0.29
LIMK2-203ENST00000340552 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
LIMK2-203ENST00000340552 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 FAM205CA6NFA0 338 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 RIMBP2O15034 1052 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 UPP2O95045 317 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
LIMK2-203ENST00000340552 PAEPP09466 180 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 USP17L8P0C7I0 530 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 PPP4CP60510 307 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 SLMAPQ14BN4 828 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
LIMK2-203ENST00000340552 CCHCR1Q8TD31 782 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 WHAMMQ8TF30 809 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 CABP5Q9NP86 173 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 SLC12A4Q9UP95 1085 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 H0YGN5 161 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 ORC4O43929 436 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 IFNAR1P17181 557 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 ABL2P42684 1182 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 SLC4A8Q2Y0W8 1093 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 ARMC9Q7Z3E5 817 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 TLR10Q9BXR5 811 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 GDAQ9Y2T3 454 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 NFS1Q9Y697 457 aa16.84■□□□□ 0.29
LIMK2-203ENST00000340552 COL11A2P13942 1736 aaPredicted RBP16.84■□□□□ 0.29
LIMK2-203ENST00000340552 A6NHS1 94 aa16.83■□□□□ 0.29
LIMK2-203ENST00000340552 TRIM21P19474 475 aaKnown RBP16.83■□□□□ 0.29
LIMK2-203ENST00000340552 RCAN1P53805 252 aa16.83■□□□□ 0.29
LIMK2-203ENST00000340552 PPP2R2AP63151 447 aa16.83■□□□□ 0.29
LIMK2-203ENST00000340552 PDCD2Q16342 344 aaPredicted RBP16.83■□□□□ 0.29
LIMK2-203ENST00000340552 SLC30A9Q6PML9 568 aa16.83■□□□□ 0.29
LIMK2-203ENST00000340552 IFIH1Q9BYX4 1025 aaKnown RBP16.83■□□□□ 0.29
LIMK2-203ENST00000340552 USO1O60763 962 aaKnown RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 HSD17B3P37058 310 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 ZNF844Q08AG5 666 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 SPA17Q15506 151 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 UAP1Q16222 522 aaPredicted RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 LRIG3Q6UXM1 1119 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 FANCBQ8NB91 859 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 DRAXINQ8NBI3 349 aaPredicted RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 CNKSR1Q969H4 720 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 RTFDC1Q9BY42 306 aaPredicted RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 KCNMB3Q9NPA1 279 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 DCDC2CA8MYV0 355 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 B4DLN1 442 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 LIN7AO14910 233 aaPredicted RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 RTN3O95197 1032 aaPredicted RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 PRCPP42785 496 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 EN1Q05925 392 aaPredicted RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 IFIT1BQ5T764 474 aaKnown RBP16.83■□□□□ 0.28
LIMK2-203ENST00000340552 TGFBRAP1Q8WUH2 860 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 MTRQ99707 1265 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 FAM167BQ9BTA0 163 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 SALL4Q9UJQ4 1053 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 PCDHA13Q9Y5I0 950 aa16.83■□□□□ 0.28
LIMK2-203ENST00000340552 EIF4E1BA6NMX2 242 aaKnown RBP16.82■□□□□ 0.28
LIMK2-203ENST00000340552 PMS1P54277 932 aaKnown RBP16.82■□□□□ 0.28
LIMK2-203ENST00000340552 GTF2IP78347 998 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 SF3A3Q12874 501 aaKnown RBP eCLIP16.82■□□□□ 0.282e-6■■■□□ 16.4
LIMK2-203ENST00000340552 ODF2Q5BJF6 829 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 CWF19L1Q69YN2 538 aaKnown RBP16.82■□□□□ 0.28
LIMK2-203ENST00000340552 ZC3H12CQ9C0D7 883 aaKnown RBP16.82■□□□□ 0.28
LIMK2-203ENST00000340552 ALADP13716 330 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 BTDP43251 543 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 ZBED6P86452 979 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 ZNF268Q14587 947 aaPredicted RBP16.82■□□□□ 0.28
LIMK2-203ENST00000340552 C12orf60Q5U649 245 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 DPP8Q6V1X1 898 aaPredicted RBP16.82■□□□□ 0.28
LIMK2-203ENST00000340552 CCDC82Q8N4S0 544 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 CCDC42Q96M95 316 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 KRT12Q99456 494 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 COA1Q9GZY4 146 aa16.82■□□□□ 0.28
LIMK2-203ENST00000340552 TMX4Q9H1E5 349 aaPredicted RBP16.82■□□□□ 0.28
LIMK2-203ENST00000340552 FAM205AQ6ZU69 1335 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 H7C1D1 291 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 NEFHP12036 1026 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 SLC15A2Q16348 729 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 CFAP221Q4G0U5 840 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 FAM47AQ5JRC9 791 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 ZNF658Q5TYW1 1059 aaPredicted RBP16.81■□□□□ 0.28
LIMK2-203ENST00000340552 TRIM22Q8IYM9 498 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 CCDC197Q8NCU1 140 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 ALS2CR12Q96Q35 445 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms