RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DNAJC19Q96DA6 116 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 FGFBP2Q9BYJ0 223 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 UBXN6Q9BZV1 441 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 TANGO6Q9C0B7 1094 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 FZD1Q9UP38 647 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 KIAA1024Q9UPX6 916 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 SAR1BQ9Y6B6 198 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 A0A1W2PQJ5 194 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 POTEB2H3BUK9 544 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 SLC1A4P43007 532 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 FIGNQ5HY92 759 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 DLK2Q6UY11 383 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 LRRC55Q6ZSA7 311 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 CCDC84Q86UT8 332 aaPredicted RBP18.06■□□□□ 0.48
LITAF-201ENST00000339430 SMCR8Q8TEV9 937 aaPredicted RBP18.06■□□□□ 0.48
LITAF-201ENST00000339430 MMS19Q96T76 1030 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 PANK4Q9NVE7 773 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 ARHGAP20Q9P2F6 1191 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 PCDHA1Q9Y5I3 950 aa18.06■□□□□ 0.48
LITAF-201ENST00000339430 POTEB3A0JP26 581 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 POTECB2RU33 542 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 ASNSP08243 561 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 STAT3P40763 770 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 LRRC63Q05C16 580 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 POTEBQ6S5H4 581 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 MYOCDQ8IZQ8 938 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 DCPSQ96C86 337 aaKnown RBP18.05■□□□□ 0.48
LITAF-201ENST00000339430 MTMR8Q96EF0 704 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 ARHGEF10LQ9HCE6 1279 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 PITPNM2Q9BZ72 1349 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 EPHX2P34913 555 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 EHHADHQ08426 723 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 DCAF15Q66K64 600 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 RRAGAQ7L523 313 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 GMCL1P1Q8NEA9 526 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 TSG101Q99816 390 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 MYH10P35580 1976 aa18.05■□□□□ 0.48
LITAF-201ENST00000339430 LRRC53A6NM62 1247 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 ZNF185O15231 689 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 FGFR1OPO95684 399 aaKnown RBP18.04■□□□□ 0.48
LITAF-201ENST00000339430 NDUFB10O96000 172 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 TAL1P17542 331 aaPredicted RBP18.04■□□□□ 0.48
LITAF-201ENST00000339430 INPP5BP32019 993 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 GYS2P54840 703 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 KIF5AQ12840 1032 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 SPA17Q15506 151 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 CDC37Q16543 378 aaPredicted RBP18.04■□□□□ 0.48
LITAF-201ENST00000339430 NELFCDQ8IXH7 590 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 SPICE1Q8N0Z3 855 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 HNRNPLLQ8WVV9 542 aaKnown RBP18.04■□□□□ 0.48
LITAF-201ENST00000339430 HOOK2Q96ED9 719 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 LRRC27Q9C0I9 530 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 PLAGL2Q9UPG8 496 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 PPP2R3BQ9Y5P8 575 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 TRAF5O00463 557 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 CTNND1O60716 968 aaKnown RBP18.04■□□□□ 0.48
LITAF-201ENST00000339430 ERLIN1O75477 346 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 EIF4A3P38919 411 aaKnown RBP18.04■□□□□ 0.48
LITAF-201ENST00000339430 VAV2P52735 878 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 PSMD2Q13200 908 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 FAM26FQ5R3K3 315 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 DCAF4Q8WV16 495 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 ZNF341Q9BYN7 854 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 GLIS2Q9BZE0 524 aaPredicted RBP18.04■□□□□ 0.48
LITAF-201ENST00000339430 DEF6Q9H4E7 631 aa18.04■□□□□ 0.48
LITAF-201ENST00000339430 H3BQF6 201 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 MAP2K7O14733 419 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 GCFC2P16383 781 aaKnown RBP18.03■□□□□ 0.48
LITAF-201ENST00000339430 PAPD7Q5XG87 772 aaKnown RBP18.03■□□□□ 0.48
LITAF-201ENST00000339430 ZNF662Q6ZS27 426 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 SULF1Q8IWU6 871 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 EHBP1Q8NDI1 1231 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 SECISBP2LQ93073 1101 aaKnown RBP18.03■□□□□ 0.48
LITAF-201ENST00000339430 DRC1Q96MC2 740 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 ANO3Q9BYT9 981 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 TMX2Q9Y320 296 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 ADM5C9JUS6 153 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 PLA2G4BP0C869 781 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 KIF11P52732 1056 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 CDK17Q00537 523 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 ZYXQ15942 572 aaKnown RBP18.03■□□□□ 0.48
LITAF-201ENST00000339430 USH1GQ495M9 461 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 CCDC40Q4G0X9 1142 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 USP50Q70EL3 339 aaPredicted RBP18.03■□□□□ 0.48
LITAF-201ENST00000339430 P2RX7Q99572 595 aaKnown RBP18.03■□□□□ 0.48
LITAF-201ENST00000339430 IFIH1Q9BYX4 1025 aaKnown RBP18.03■□□□□ 0.48
LITAF-201ENST00000339430 ZHX3Q9H4I2 956 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 MLXIPQ9HAP2 919 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 PDE11AQ9HCR9 933 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 JADE2Q9NQC1 790 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 ATAD5Q96QE3 1844 aa18.03■□□□□ 0.48
LITAF-201ENST00000339430 TUBB4BP68371 445 aa18.02■□□□□ 0.48
LITAF-201ENST00000339430 PRKG1Q13976 671 aa18.02■□□□□ 0.48
LITAF-201ENST00000339430 HDXQ7Z353 690 aa18.02■□□□□ 0.48
LITAF-201ENST00000339430 GPBP1Q86WP2 473 aa18.02■□□□□ 0.48
LITAF-201ENST00000339430 WRNIP1Q96S55 665 aa18.02■□□□□ 0.48
LITAF-201ENST00000339430 NLRC4Q9NPP4 1024 aa18.02■□□□□ 0.48
LITAF-201ENST00000339430 BMP2KQ9NSY1 1161 aaPredicted RBP18.02■□□□□ 0.48
LITAF-201ENST00000339430 PCDHA13Q9Y5I0 950 aa18.02■□□□□ 0.48
LITAF-201ENST00000339430 KDM3AQ9Y4C1 1321 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms