RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 E2F4Q16254 413 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 METTL7BQ6UX53 244 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 KRBA2Q6ZNG9 492 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 MIER3Q7Z3K6 550 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 KATNBL1Q9H079 304 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 TMEM63CQ9P1W3 806 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 DDX41Q9UJV9 622 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 A0A087X0B3 334 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 ACTN4O43707 911 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 IGHA2P01877 340 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 PLCG1P19174 1290 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 FLT3LGP49771 235 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 CCDC62Q6P9F0 684 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 CNNM3Q8NE01 707 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 DHX58Q96C10 678 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 HSD17B14Q9BPX1 270 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 EIF2AK1Q9BQI3 630 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 EML1O00423 815 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 NKRFO15226 690 aaKnown RBP eCLIP16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 CCNE2O96020 404 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 PRKCZQ05513 592 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 GRB10Q13322 594 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 ZRSR1Q15695 479 aaKnown RBP16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 LONRF3Q496Y0 759 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 TMEM119Q4V9L6 283 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 TAPT1Q6NXT6 567 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 SAMM50Q9Y512 469 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 PCDHA10Q9Y5I2 948 aa16.29■□□□□ 0.2
NIPAL3-202ENST00000339255 FARP2O94887 1054 aaPredicted RBP16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 MYL1P05976 194 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 P4HBP07237 508 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 PRMT2P55345 433 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 SP2Q02086 613 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 CELF3Q5SZQ8 465 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 MFSD14CQ5VZR4 134 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 IQSEC1Q6DN90 963 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 PDXDC2PQ6P474 469 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 CYFIP1Q7L576 1253 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 CATSPER3Q86XQ3 398 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 CD99L2Q8TCZ2 262 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 PANK2Q9BZ23 570 aa16.28■□□□□ 0.2
NIPAL3-202ENST00000339255 DKC1O60832 514 aaKnown RBP eCLIP16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 GGPS1O95749 300 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 PSAPP07602 524 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 SPATA31C1P0DKV0 1188 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 ACTR2P61160 394 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 CCL14Q16627 93 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 LY6KQ17RY6 165 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 NAALADL2Q58DX5 795 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 MIS18BP1Q6P0N0 1132 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 ZNF296Q8WUU4 475 aaPredicted RBP16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 MLXIPQ9HAP2 919 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 WBP1LQ9NX94 342 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 SERTAD1Q9UHV2 236 aa16.27■□□□□ 0.2
NIPAL3-202ENST00000339255 POTEB3A0JP26 581 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 MED24O75448 989 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 ARIH2O95376 493 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 GH1P01241 217 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 CYP4A11Q02928 519 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 LAMC2Q13753 1193 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 ZSCAN23Q3MJ62 389 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 POTEBQ6S5H4 581 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 RBM43Q6ZSC3 357 aaKnown RBP16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 DHX37Q8IY37 1157 aaKnown RBP16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 ATP6V0A1Q93050 837 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 PNMA5Q96PV4 448 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 LXNQ9BS40 222 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 ZSWIM4Q9H7M6 989 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 PDGFCQ9NRA1 345 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 GABRQQ9UN88 632 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 DNM3Q9UQ16 869 aa16.27■□□□□ 0.19
NIPAL3-202ENST00000339255 POTEFA5A3E0 1075 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 SLITRK3O94933 977 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 ATG7O95352 703 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 QARSP47897 775 aaKnown RBP16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 PSMC5P62195 406 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 AMPD3Q01432 767 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 CAMK4Q16566 473 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 CCDC144BQ3MJ40 725 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 DUSP28Q4G0W2 176 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 POTEGQ6S5H5 508 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 TPH2Q8IWU9 490 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 DNAJC5GQ8N7S2 189 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 LARP4BQ92615 738 aaKnown RBP16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 RAD54LQ92698 747 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 LRRC27Q9C0I9 530 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 KBTBD4Q9NVX7 518 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 KIAA1024Q9UPX6 916 aa16.26■□□□□ 0.19
NIPAL3-202ENST00000339255 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 LYPLA2O95372 231 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms