RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SMAP1Q8IYB5 467 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 RDM1Q8NG50 284 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 HAS1Q92839 578 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 FERMT2Q96AC1 680 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 MTMR9Q96QG7 549 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 SEZ6LQ9BYH1 1024 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 SMARCAD1Q9H4L7 1026 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 SAMM50Q9Y512 469 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 PCDHA10Q9Y5I2 948 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 ELP1O95163 1332 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 WNT7AO00755 349 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 ATG7O95352 703 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 BRD1O95696 1058 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 F13A1P00488 732 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 OR52Z1P0C646 297 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 HOXD8P13378 290 aaPredicted RBP13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 TCF7P36402 384 aaPredicted RBP13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 JAK3P52333 1124 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 PURAQ00577 322 aaKnown RBP13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 NBR1Q14596 966 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 MIER3Q7Z3K6 550 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 GLG1Q92896 1179 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 TNPO1Q92973 898 aaKnown RBP13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 GJA10Q969M2 543 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 KATNAL1Q9BW62 490 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 TTC12Q9H892 705 aaPredicted RBP13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 STARD7Q9NQZ5 370 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 DISC1Q9NRI5 854 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
SPTLC1-202ENST00000337841 A0A1W2PQ45 241 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 A0A1W2PQY0 241 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 BACH1O14867 736 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 CHMP2AO43633 222 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 CCNE2O96020 404 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 COL6A1P12109 1028 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 STAT5BP51692 787 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 CHMP4BP1P59074 171 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 PPP2R5CQ13362 524 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 TMEM266Q2M3C6 531 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 ATL3Q6DD88 541 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 SWSAP1Q6NVH7 229 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 ABHD15Q6UXT9 468 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 DTHD1Q6ZMT9 781 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 C4orf32Q8N8J7 132 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 RAB34Q9BZG1 259 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 UNC45AQ9H3U1 944 aa13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 ZNF215Q9UL58 517 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-202ENST00000337841 MCM3APO60318 1980 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 A0A0U1RQG5 324 aaPredicted RBP13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 H3BRB1 525 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 LGR5O75473 907 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 LGALS2P05162 132 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 SUPT20HL2P0C7V6 817 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 PRPHP41219 470 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 PSEN2P49810 448 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 ITGA7Q13683 1181 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 PKP1Q13835 747 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 PDIA5Q14554 519 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 EPHA7Q15375 998 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 ARL6IP4Q66PJ3 421 aaKnown RBP13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 FAM173BQ6P4H8 233 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 SLC39A5Q6ZMH5 540 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 PLPPR4Q7Z2D5 763 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 DIS3LQ8TF46 1054 aaKnown RBP13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 IPO9Q96P70 1041 aaKnown RBP13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 C16orf70Q9BSU1 422 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 HTATIP2Q9BUP3 242 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 TUT1Q9H6E5 874 aaKnown RBP13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 ZNF302Q9NR11 478 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 ERAP1Q9NZ08 941 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 CFAP45Q9UL16 551 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
SPTLC1-202ENST00000337841 IGKV6D-21A0A0A0MT36 114 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 TECP42680 631 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 SLC26A2P50443 739 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 ATP2C1P98194 919 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 MFSD10Q14728 455 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 NBPF20Q3BBV1 942 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 NCAPH2Q6IBW4 605 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 PDXDC2PQ6P474 469 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 B3GNT9Q6UX72 402 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 UBE2Q1Q7Z7E8 422 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 ERMNQ8TAM6 284 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 KAT2BQ92831 832 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 NRBP2Q9NSY0 501 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 TFIP11Q9UBB9 837 aaKnown RBP13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 GABBR1Q9UBS5 961 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 VAV3Q9UKW4 847 aa13.4□□□□□ -0.26
SPTLC1-202ENST00000337841 TELO2Q9Y4R8 837 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms