RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 DYDC2Q96IM9 177 aa25.6■■□□□ 1.69
CLPTM1-201ENST00000337392 DNM3Q9UQ16 869 aa25.6■■□□□ 1.69
CLPTM1-201ENST00000337392 RPA1P27694 616 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 MAN2A1Q16706 1144 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 TSR1Q2NL82 804 aaKnown RBP25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 CIAPIN1Q6FI81 312 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 ERGIC2Q96RQ1 377 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 BCS1LQ9Y276 419 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 MACROD2A1Z1Q3 448 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 LRRC53A6NM62 1247 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 GCOM1H8Y6P7 765 aaPredicted RBP25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 POLR2MP0CAP2 368 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 PRELPP51888 382 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 LRRC63Q05C16 580 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 HAUS3Q68CZ6 603 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 RANBP17Q9H2T7 1088 aaKnown RBP25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 KCTD10Q9H3F6 313 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 ST7Q9NRC1 585 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 ARHGAP20Q9P2F6 1191 aa25.59■■□□□ 1.69
CLPTM1-201ENST00000337392 RGPD3A6NKT7 1758 aaPredicted RBP25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 RGPD4Q7Z3J3 1758 aa25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 LRCH2Q5VUJ6 765 aa25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 WNK4Q96J92 1243 aa25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 FOSP01100 380 aaPredicted RBP25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 TUBB4AP04350 444 aa25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 ZBED6P86452 979 aa25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 CCDC122Q5T0U0 273 aa25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 TAOK3Q9H2K8 898 aa25.58■■□□□ 1.69
CLPTM1-201ENST00000337392 CLIC2O15247 247 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 MAEAQ7L5Y9 396 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 TSG101Q99816 390 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 RNF216Q9NWF9 866 aaPredicted RBP25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 COL4A3BPQ9Y5P4 624 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 PHF20L1A8MW92 1017 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 CIITAP33076 1130 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 FKBP3Q00688 224 aaKnown RBP25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 ARID5AQ03989 594 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 MEA1Q16626 185 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 OTOP1Q7RTM1 612 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 JDP2Q8WYK2 163 aa25.57■■□□□ 1.68
CLPTM1-201ENST00000337392 SLITRK3O94933 977 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 ZC2HC1CQ53FD0 456 aaPredicted RBP25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 MOXD1Q6UVY6 613 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 ANKRD13CQ8N6S4 541 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 BANK1Q8NDB2 785 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 RAVER2Q9HCJ3 691 aaKnown RBP25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 CCPG1Q9ULG6 757 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 ZNF536O15090 1300 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 H2AFXP16104 143 aaPredicted RBP25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 PSMD2Q13200 908 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 ADAM9Q13443 819 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 KIAA1328Q86T90 577 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 SYT2Q8N9I0 419 aaPredicted RBP25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 AGBL3Q8NEM8 1001 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 HOOK2Q96ED9 719 aa25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 NAP1L4Q99733 375 aaKnown RBP25.56■■□□□ 1.68
CLPTM1-201ENST00000337392 CTAGE9A4FU28 777 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 PIK3CDO00329 1044 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 DALRD3Q5D0E6 543 aaKnown RBP25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 DLK2Q6UY11 383 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 DNAAF5Q86Y56 855 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 TEPSINQ96N21 525 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 NR2F2P24468 414 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 NMT1P30419 496 aaKnown RBP25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 SEMA3FQ13275 785 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 GRIPAP1Q4V328 841 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 ZBED3Q96IU2 234 aaPredicted RBP25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 DRC1Q96MC2 740 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 FAM20AQ96MK3 541 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 LRRC27Q9C0I9 530 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 RABGAP1Q9Y3P9 1069 aa25.55■■□□□ 1.68
CLPTM1-201ENST00000337392 COL2A1P02458 1487 aaPredicted RBP25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 ATP1A1P05023 1023 aaKnown RBP25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 ACTN1P12814 892 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 ALAS1P13196 640 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 CASP4P49662 377 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 MUM1L1Q5H9M0 696 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 ERMNQ8TAM6 284 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 CHURC1Q8WUH1 139 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 WDR11Q9BZH6 1224 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 TMEM150BA6NC51 233 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 EFCAB8A8MWE9 144 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 PPP1R2P41236 205 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 NBPF12Q5TAG4 269 aaPredicted RBP25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 UNC45AQ9H3U1 944 aa25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 ZNHIT6Q9NWK9 470 aaKnown RBP25.54■■□□□ 1.68
CLPTM1-201ENST00000337392 PSMD10O75832 226 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 GCNT3O95395 438 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 ITGB5P18084 799 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 EIF4A3P38919 411 aaKnown RBP25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 PLS1Q14651 629 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 MICALL2Q8IY33 904 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 ZNF577Q9BSK1 485 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 GAS7O60861 476 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 NOL4O94818 638 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 ASNSP08243 561 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 MTMR2Q13614 643 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 COG2Q14746 738 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 CEP55Q53EZ4 464 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 RINT1Q6NUQ1 792 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms