RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TSPY1Q01534 308 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 USPL1Q5W0Q7 1092 aa13.25□□□□□ -0.29
FN1-202ENST00000336916 SUN1O94901 812 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 CCDC127Q96BQ5 260 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 TIPINQ9BVW5 301 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 ZNF341Q9BYN7 854 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 TRIM15Q9C019 465 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 GPATCH11Q8N954 259 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 HSP90AA5PQ58FG0 334 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 ARHGEF18Q6ZSZ5 1173 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 KLHL7Q8IXQ5 586 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 PI4K2BQ8TCG2 481 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 SLF1Q9BQI6 1058 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 SART1O43290 800 aaKnown RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 THOC5Q13769 683 aaKnown RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 PDCD2Q16342 344 aaPredicted RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 MRPL40Q9NQ50 206 aaKnown RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 MAP3K20Q9NYL2 800 aaKnown RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 IKBKBO14920 756 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 RYBPQ8N488 228 aaPredicted RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 NUDCD1Q96RS6 583 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 IFRD2Q12894 506 aaPredicted RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 MYL10Q9BUA6 226 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 KDM6AO15550 1401 aaPredicted RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 TNS3Q68CZ2 1445 aa13.24□□□□□ -0.29
FN1-202ENST00000336916 EIF3BP55884 814 aaKnown RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 TFAMQ00059 246 aaKnown RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 FNBP4Q8N3X1 1017 aaPredicted RBP13.24□□□□□ -0.29
FN1-202ENST00000336916 MED14O60244 1454 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SLC39A14Q15043 492 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 DIXDC1Q155Q3 683 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 TMTC4Q5T4D3 741 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 VPS39Q96JC1 886 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SLC8A1P32418 973 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SLMAPQ14BN4 828 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 TRIM72Q6ZMU5 477 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 IL17REQ8NFR9 667 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SYNGAP1Q96PV0 1343 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 ACTN1P12814 892 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 STXBP2Q15833 593 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 RNF207Q6ZRF8 634 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 TOGARAM2Q6ZUX3 1019 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 RHOT2Q8IXI1 618 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 DNAAF3Q8N9W5 541 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 FAM96AQ9H5X1 160 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 CYP26B1Q9NR63 512 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
FN1-202ENST00000336916 CALB1P05937 261 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 TTC13Q8NBP0 860 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 DAAM1Q9Y4D1 1078 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 HIP1RO75146 1068 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SRGAP2CP0DJJ0 459 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 RNASE9P60153 205 aaKnown RBP13.23□□□□□ -0.29
FN1-202ENST00000336916 MYRIPQ8NFW9 859 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 EIF2AQ9BY44 585 aaKnown RBP13.23□□□□□ -0.29
FN1-202ENST00000336916 EFCC1Q9HA90 598 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 CASZ1Q86V15 1759 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 PDE4DIPQ5VU43 2346 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SERPING1P05155 500 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 PYGLP06737 847 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 TAP1Q03518 808 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 PSMD6Q15008 389 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 LRRC31Q6UY01 552 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 PARD3BQ8TEW8 1205 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SERPINI1Q99574 410 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 MRGBPQ9NV56 204 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SERTAD1Q9UHV2 236 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 POLR2FP61218 127 aaKnown RBP13.23□□□□□ -0.29
FN1-202ENST00000336916 CAV1Q03135 178 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 ENOSF1Q7L5Y1 443 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 BLZF1Q9H2G9 400 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 THAP9Q9H5L6 903 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 MAD1L1Q9Y6D9 718 aa13.23□□□□□ -0.29
FN1-202ENST00000336916 BRD1O95696 1058 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 PDIA3P30101 505 aaKnown RBP13.22□□□□□ -0.29
FN1-202ENST00000336916 PDE1BQ01064 536 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 KIF2CQ99661 725 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 STK36Q9NRP7 1315 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 FOXP2O15409 715 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 AP3M2P53677 418 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 ANKRD20A4Q4UJ75 823 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 ANKRD20A8PQ5CZ79 823 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 ANKRD20A2Q5SQ80 823 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 ANKRD20A1Q5TYW2 823 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 RAB42Q8N4Z0 105 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 XPO4Q9C0E2 1151 aaKnown RBP13.22□□□□□ -0.29
FN1-202ENST00000336916 MYH2Q9UKX2 1941 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 A0A0D9SFI3 127 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 CCDC151A5D8V7 595 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 P2RX5Q93086 422 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 STXBP3O00186 592 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 PODXLO00592 558 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 MMP1P03956 469 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 RPLP2P05387 115 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms