RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 UTP14CQ5TAP6 766 aaKnown RBP23.68■■□□□ 1.38
LIMS2-201ENST00000324938 PDXDC1Q6P996 788 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 RRAGAQ7L523 313 aa23.68■■□□□ 1.38
LIMS2-201ENST00000324938 IGLV3-22A0A075B6J6 115 aa23.67■■□□□ 1.38
LIMS2-201ENST00000324938 ANO9A1A5B4 782 aa23.67■■□□□ 1.38
LIMS2-201ENST00000324938 ATP1A1P05023 1023 aaKnown RBP23.67■■□□□ 1.38
LIMS2-201ENST00000324938 ERCC3P19447 782 aa23.67■■□□□ 1.38
LIMS2-201ENST00000324938 KIF11P52732 1056 aa23.67■■□□□ 1.38
LIMS2-201ENST00000324938 PABPC4Q13310 644 aaKnown RBP eCLIP23.67■■□□□ 1.38
LIMS2-201ENST00000324938 SPDYE2Q495Y8 402 aa23.67■■□□□ 1.38
LIMS2-201ENST00000324938 RTKN2Q8IZC4 609 aa23.67■■□□□ 1.38
LIMS2-201ENST00000324938 POLR3CQ9BUI4 534 aaPredicted RBP23.67■■□□□ 1.38
LIMS2-201ENST00000324938 MEIS1O00470 390 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 FAM83BQ5T0W9 1011 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 KCTD17Q8N5Z5 321 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 SMCR8Q8TEV9 937 aaPredicted RBP23.66■■□□□ 1.38
LIMS2-201ENST00000324938 CAMKK2Q96RR4 588 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 REEP2Q9BRK0 252 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 ENC1O14682 589 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 RAD17O75943 681 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 ZNF76P36508 570 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 EIF4A3P38919 411 aaKnown RBP23.66■■□□□ 1.38
LIMS2-201ENST00000324938 KRT26Q7Z3Y9 468 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 CCDC155Q8N6L0 562 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 TTLL6Q8N841 843 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 CYP2W1Q8TAV3 490 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 CEP72Q9P209 647 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 FAM184BQ9ULE4 1060 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 SAR1BQ9Y6B6 198 aa23.66■■□□□ 1.38
LIMS2-201ENST00000324938 CACNA2D4Q7Z3S7 1137 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 HNRNPLLQ8WVV9 542 aaKnown RBP23.65■■□□□ 1.38
LIMS2-201ENST00000324938 SECISBP2LQ93073 1101 aaKnown RBP23.65■■□□□ 1.38
LIMS2-201ENST00000324938 IFIH1Q9BYX4 1025 aaKnown RBP23.65■■□□□ 1.38
LIMS2-201ENST00000324938 RANBP17Q9H2T7 1088 aaKnown RBP23.65■■□□□ 1.38
LIMS2-201ENST00000324938 ZHX3Q9H4I2 956 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 HDAC6Q9UBN7 1215 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 PCDHA13Q9Y5I0 950 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 MYH10P35580 1976 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 USO1O60763 962 aaKnown RBP23.65■■□□□ 1.38
LIMS2-201ENST00000324938 FKBP1CQ5VVH2 108 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 EPM2AIP1Q7L775 607 aaPredicted RBP23.65■■□□□ 1.38
LIMS2-201ENST00000324938 OGFOD1Q8N543 542 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 PNKPQ96T60 521 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 NUCKS1Q9H1E3 243 aaKnown RBP23.65■■□□□ 1.38
LIMS2-201ENST00000324938 DEF6Q9H4E7 631 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.65■■□□□ 1.38
LIMS2-201ENST00000324938 LOXHD1Q8IVV2 1947 aa23.65■■□□□ 1.38
LIMS2-201ENST00000324938 SASH3O75995 380 aa23.64■■□□□ 1.37
LIMS2-201ENST00000324938 CASP5P51878 434 aa23.64■■□□□ 1.37
LIMS2-201ENST00000324938 MAPK8IP2Q13387 824 aaPredicted RBP23.64■■□□□ 1.37
LIMS2-201ENST00000324938 SFR1Q86XK3 245 aa23.64■■□□□ 1.37
LIMS2-201ENST00000324938 LARGE2Q8N3Y3 721 aa23.64■■□□□ 1.37
LIMS2-201ENST00000324938 EIF2AK1Q9BQI3 630 aaKnown RBP23.64■■□□□ 1.37
LIMS2-201ENST00000324938 SH2D4AQ9H788 454 aa23.64■■□□□ 1.37
LIMS2-201ENST00000324938 TRAF3IP3Q9Y228 551 aa23.64■■□□□ 1.37
LIMS2-201ENST00000324938 DUSP10Q9Y6W6 482 aa23.64■■□□□ 1.37
LIMS2-201ENST00000324938 SSU72P8A0A1W2PR75 194 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 CETN3O15182 167 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 TBC1D12O60347 775 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 PLA2G6O60733 806 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 NOL4O94818 638 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 ADAM9Q13443 819 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 CHURC1Q8WUH1 139 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 SYN2Q92777 582 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-201ENST00000324938 VCPKMTQ9H867 229 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 EML1O00423 815 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 AKR1B10O60218 316 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 EYA4O95677 639 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 CYP4A11Q02928 519 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 EN1Q05925 392 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-201ENST00000324938 LONRF2Q1L5Z9 754 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 ASTE1Q2TB18 679 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-201ENST00000324938 WDR18Q9BV38 432 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 FUT8Q9BYC5 575 aa23.63■■□□□ 1.37
LIMS2-201ENST00000324938 MACROD2A1Z1Q3 448 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 GCOM1H8Y6P7 765 aaPredicted RBP23.62■■□□□ 1.37
LIMS2-201ENST00000324938 CFBP00751 764 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 POLR2MP0CAP2 368 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 HGSNATQ68CP4 663 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 NOA1Q8NC60 698 aaKnown RBP23.62■■□□□ 1.37
LIMS2-201ENST00000324938 LSM14BQ9BX40 385 aaKnown RBP23.62■■□□□ 1.37
LIMS2-201ENST00000324938 RABGAP1Q9Y3P9 1069 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 TUBBP07437 444 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 NR2F2P24468 414 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 KNOP1Q1ED39 458 aaKnown RBP23.62■■□□□ 1.37
LIMS2-201ENST00000324938 BMT2Q1RMZ1 405 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 CCDC174Q6PII3 467 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 MTMR14Q8NCE2 650 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 TRIM58Q8NG06 486 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 UBXN6Q9BZV1 441 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 BHMT2Q9H2M3 363 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 TUFT1Q9NNX1 390 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 ST7Q9NRC1 585 aa23.62■■□□□ 1.37
LIMS2-201ENST00000324938 ZNF277Q9NRM2 450 aaPredicted RBP23.62■■□□□ 1.37
LIMS2-201ENST00000324938 RHOXF2BP0C7M4 288 aa23.61■■□□□ 1.37
LIMS2-201ENST00000324938 CKAP4Q07065 602 aaKnown RBP23.61■■□□□ 1.37
LIMS2-201ENST00000324938 FAM160B2Q86V87 743 aa23.61■■□□□ 1.37
LIMS2-201ENST00000324938 TBC1D5Q92609 795 aa23.61■■□□□ 1.37
LIMS2-201ENST00000324938 RPGRIP1Q96KN7 1286 aa23.61■■□□□ 1.37
LIMS2-201ENST00000324938 RHOXF2Q9BQY4 288 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms