RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 FGFR1OPO95684 399 aaKnown RBP21.84■■□□□ 1.09
CRLF3-201ENST00000324238 PSMC6P62333 389 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 CFAP58Q5T655 872 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 FBXW10Q5XX13 1052 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 RNPC3Q96LT9 517 aaKnown RBP21.84■■□□□ 1.09
CRLF3-201ENST00000324238 USP40Q9NVE5 1235 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 COL22A1Q8NFW1 1626 aaPredicted RBP21.84■■□□□ 1.09
CRLF3-201ENST00000324238 RAD51CO43502 376 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 SHOX2O60902 331 aaPredicted RBP21.84■■□□□ 1.09
CRLF3-201ENST00000324238 GYS1P13807 737 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 NFIAQ12857 509 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 GJB7Q6PEY0 223 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 SCFD1Q8WVM8 642 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 G3V3G9 751 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 DCAF8Q5TAQ9 597 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 RAB34Q9BZG1 259 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 ATP6V0A2Q9Y487 856 aa21.84■■□□□ 1.09
CRLF3-201ENST00000324238 PLA2G4BP0C869 781 aa21.83■■□□□ 1.09
CRLF3-201ENST00000324238 PRLRP16471 622 aa21.83■■□□□ 1.09
CRLF3-201ENST00000324238 SF3A3Q12874 501 aaKnown RBP eCLIP21.83■■□□□ 1.09
CRLF3-201ENST00000324238 ZCWPW2Q504Y3 356 aa21.83■■□□□ 1.09
CRLF3-201ENST00000324238 MAATS1Q7Z4T9 603 aa21.83■■□□□ 1.09
CRLF3-201ENST00000324238 KAT2BQ92831 832 aa21.83■■□□□ 1.09
CRLF3-201ENST00000324238 CCDC88AQ3V6T2 1871 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 GRID2IPA4D2P6 1211 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 NDUFAB1O14561 156 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 PJA2O43164 708 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 OPA1O60313 960 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 SERPING1P05155 500 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 PTK2Q05397 1052 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 TMEM119Q4V9L6 283 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 DCAF17Q5H9S7 520 aaPredicted RBP21.83■■□□□ 1.08
CRLF3-201ENST00000324238 TCERG1LQ5VWI1 586 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 CERS5Q8N5B7 392 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 SH3GL2Q99962 352 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 CEP72Q9P209 647 aa21.83■■□□□ 1.08
CRLF3-201ENST00000324238 SFI1A8K8P3 1242 aa21.82■■□□□ 1.08
CRLF3-201ENST00000324238 PPP1R2P41236 205 aa21.82■■□□□ 1.08
CRLF3-201ENST00000324238 RBM5P52756 815 aaKnown RBP eCLIP21.82■■□□□ 1.08
CRLF3-201ENST00000324238 PABPC4Q13310 644 aaKnown RBP eCLIP21.82■■□□□ 1.087e-6■■□□□ 14.2
CRLF3-201ENST00000324238 EMILIN3Q9NT22 766 aa21.82■■□□□ 1.08
CRLF3-201ENST00000324238 CEP104O60308 925 aa21.82■■□□□ 1.08
CRLF3-201ENST00000324238 KCNH2Q12809 1159 aa21.82■■□□□ 1.08
CRLF3-201ENST00000324238 EMBQ6PCB8 327 aa21.82■■□□□ 1.08
CRLF3-201ENST00000324238 IFT20Q8IY31 132 aa21.82■■□□□ 1.08
CRLF3-201ENST00000324238 PSTPIP2Q9H939 334 aa21.82■■□□□ 1.08
CRLF3-201ENST00000324238 GOLGA8KD6RF30 607 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 MED24O75448 989 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 CYP4A11Q02928 519 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 NAB2Q15742 525 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 MEX3CQ5U5Q3 659 aaKnown RBP21.81■■□□□ 1.08
CRLF3-201ENST00000324238 TADA2BQ86TJ2 420 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 PIK3R5Q8WYR1 880 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 LAMB2P55268 1798 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 KCNA1Q09470 495 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 PPM1EQ8WY54 764 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 BCCIPQ9P287 314 aaKnown RBP eCLIP21.81■■□□□ 1.08
CRLF3-201ENST00000324238 BCS1LQ9Y276 419 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 TMCO5BA8MYB1 307 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 CLIC2O15247 247 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 TOM1O60784 492 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 ATP2B4P23634 1241 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 NR2F2P24468 414 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 DDR1Q08345 913 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 ADAT2Q7Z6V5 191 aaKnown RBP21.81■■□□□ 1.08
CRLF3-201ENST00000324238 RBM17Q96I25 401 aaKnown RBP21.81■■□□□ 1.08
CRLF3-201ENST00000324238 RIC8AQ9NPQ8 531 aa21.81■■□□□ 1.08
CRLF3-201ENST00000324238 BMP2KQ9NSY1 1161 aaPredicted RBP21.81■■□□□ 1.08
CRLF3-201ENST00000324238 AJAP1Q9UKB5 411 aaPredicted RBP21.81■■□□□ 1.08
CRLF3-201ENST00000324238 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
CRLF3-201ENST00000324238 SHTN1A0MZ66 631 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 PDIA5Q14554 519 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 ASIC2Q16515 512 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 SLC18A3Q16572 532 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 CEP85LQ5SZL2 805 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 ZNF572Q7Z3I7 529 aaPredicted RBP21.8■■□□□ 1.08
CRLF3-201ENST00000324238 ZNF571Q7Z3V5 609 aaPredicted RBP21.8■■□□□ 1.08
CRLF3-201ENST00000324238 DBNDD1Q9H9R9 158 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 SSU72P8A0A1W2PR75 194 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 RSPH10B2B2RC85 870 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 RSPH10BP0C881 870 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 NAA35Q5VZE5 725 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 KIAA0825Q8IV33 1275 aa21.8■■□□□ 1.08
CRLF3-201ENST00000324238 DDX47Q9H0S4 455 aaKnown RBP21.8■■□□□ 1.08
CRLF3-201ENST00000324238 IKQ13123 557 aaPredicted RBP21.79■■□□□ 1.08
CRLF3-201ENST00000324238 COBLL1Q53SF7 1204 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 ARSHQ5FYA8 562 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 TRIM59Q8IWR1 403 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 SPAG5Q96R06 1193 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 ITGA4P13612 1032 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 CYP11B2P19099 503 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 USH1GQ495M9 461 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 IQCKQ8N0W5 287 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 TRIM31Q9BZY9 425 aa21.79■■□□□ 1.08
CRLF3-201ENST00000324238 CASP4P49662 377 aa21.78■■□□□ 1.08
CRLF3-201ENST00000324238 MEI1Q5TIA1 1274 aa21.78■■□□□ 1.08
CRLF3-201ENST00000324238 INPP4AQ96PE3 977 aaPredicted RBP21.78■■□□□ 1.08
CRLF3-201ENST00000324238 ZC3H12CQ9C0D7 883 aaKnown RBP21.78■■□□□ 1.08
CRLF3-201ENST00000324238 GDF3Q9NR23 364 aa21.78■■□□□ 1.08
CRLF3-201ENST00000324238 SERPINB13Q9UIV8 391 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms