RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ISCUQ9H1K1 167 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 NOD2Q9HC29 1040 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 STX8Q9UNK0 236 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 NFS1Q9Y697 457 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 KRIT1O00522 736 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 TTI1O43156 1089 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 COPB2P35606 906 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 IGHMBP2P38935 993 aaKnown RBP10.58□□□□□ -0.72
PTPRA-202ENST00000318266 IFNAR2P48551 515 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 CACNB1Q02641 598 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-202ENST00000318266 RUFY4Q6ZNE9 571 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 LRRC45Q96CN5 670 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 CDK5RAP3Q96JB5 506 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 TRIM6Q9C030 488 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-202ENST00000318266 USP17L3A6NCW0 530 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 USP17L4A6NCW7 530 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 MYL1P05976 194 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 ELF3P78545 371 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-202ENST00000318266 AMPD3Q01432 767 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 TFAP4Q01664 338 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 DRP2Q13474 957 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 SV2BQ7L1I2 683 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 USP17L1Q7RTZ2 530 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 NSMCE1Q8WV22 266 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 TATDN2Q93075 761 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 CALML4Q96GE6 196 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 C7orf25Q9BPX7 421 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 RNF14Q9UBS8 474 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 BAZ2AQ9UIF9 1905 aaKnown RBP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 POTEMA6NI47 508 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 ATP6V1G2O95670 118 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 APBA3O96018 575 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 NAPAP54920 295 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 PRPF4BQ13523 1007 aaKnown RBP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 SLC35G1Q2M3R5 365 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 EMC10Q5UCC4 262 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 SUSD4Q5VX71 490 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 RCSD1Q6JBY9 416 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 ZNF384Q8TF68 577 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 GJA10Q969M2 543 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 DYNLL2Q96FJ2 89 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 TRIM51Q9BSJ1 452 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 CCDC113Q9H0I3 377 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 LUC7LQ9NQ29 371 aaKnown RBP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 TIAM2Q8IVF5 1701 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 SSU72P8A0A1W2PR75 194 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 F8W031 263 aaPredicted RBP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 CYTH3O43739 400 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 NOL4O94818 638 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 SERPING1P05155 500 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 ACTN1P12814 892 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 EPS15P42566 896 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 CCT6BQ92526 530 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 ANKS1AQ92625 1134 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 TACO1Q9BSH4 297 aaKnown RBP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 MMTAG2Q9BU76 263 aaKnown RBP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 MCM9Q9NXL9 1143 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 NOC2LQ9Y3T9 749 aaKnown RBP10.57□□□□□ -0.72
PTPRA-202ENST00000318266 ATP6V0A2Q9Y487 856 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 CD2APQ9Y5K6 639 aa10.57□□□□□ -0.72
PTPRA-202ENST00000318266 CAND2O75155 1236 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 USP17L8P0C7I0 530 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 IL2RBP14784 551 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 SLC18A3Q16572 532 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 LRRC55Q6ZSA7 311 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.725e-6■■□□□ 11.7
PTPRA-202ENST00000318266 MTFR1LQ9H019 292 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 ZHX3Q9H4I2 956 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 BIN2Q9UBW5 565 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-202ENST00000318266 TRIM37O94972 964 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 KIF4AO95239 1232 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 DRD4P21917 467 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 SLC8A1P32418 973 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 MRPL12P52815 198 aaKnown RBP10.56□□□□□ -0.72
PTPRA-202ENST00000318266 EVA1CP58658 441 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 BIRC3Q13489 604 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 CCDC50Q8IVM0 306 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 CCDC63Q8NA47 563 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 CHMP6Q96FZ7 201 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 NLRP3Q96P20 1036 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 PSMD1Q99460 953 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 ELAC2Q9BQ52 826 aaKnown RBP10.56□□□□□ -0.72
PTPRA-202ENST00000318266 NUDT12Q9BQG2 462 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 GGA2Q9UJY4 613 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 SHBGP04278 402 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 MMEP08473 750 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 VIMP08670 466 aaKnown RBP10.56□□□□□ -0.72
PTPRA-202ENST00000318266 GCKP35557 465 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 SLCO1A2P46721 670 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 CCNHP51946 323 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-202ENST00000318266 XRCC4Q13426 336 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 CRYMQ14894 314 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 NBPF9Q3BBW0 867 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 LRIG3Q6UXM1 1119 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 METTL13Q8N6R0 699 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 SLC44A5Q8NCS7 719 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 CCDC197Q8NCU1 140 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms