RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MAEAQ7L5Y9 396 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 LRRC59Q96AG4 307 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 RBM33Q96EV2 1170 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 MMS19Q96T76 1030 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TCHPQ9BT92 498 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 DLGAP2Q9P1A6 1054 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 DDX25Q9UHL0 483 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 KCNH3Q9ULD8 1083 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 EFR3BQ9Y2G0 817 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 ORC4O43929 436 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 MFAP3LO75121 409 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 GSTA2P09210 222 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TROVE2P10155 538 aaKnown RBP eCLIP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 BMP6P22004 513 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 GSTT1P30711 240 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 KRT72Q14CN4 511 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 RCN1Q15293 331 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 SEC23AQ15436 765 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TTC39AQ5SRH9 613 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 SOGA3Q5TF21 947 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 FOXB2Q5VYV0 432 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TMEM53Q6P2H8 277 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 RAD9BQ6WBX8 426 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TRAPPC11Q7Z392 1133 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TSEN2Q8NCE0 465 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 ZIM3Q96PE6 472 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 STRBPQ96SI9 672 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 SLF1Q9BQI6 1058 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 PHF20Q9BVI0 1012 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 BRIP1Q9BX63 1249 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 DAAM1Q9Y4D1 1078 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 LRRC42Q9Y546 428 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF646O15015 1829 aaPredicted RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 GOLGA6L10A0A0M3HER8 536 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 KLF18A0A0U1RQI7 1052 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 CCT8L1PA6NM43 557 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 GOLGA8BA8MQT2 603 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF213O14771 459 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 HNRNPRO43390 633 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TRAPPC3O43617 180 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TRIM37O94972 964 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 KRT14P02533 472 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 MYCLP1P12525 358 aaPredicted RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 ATP6V1C1P21283 382 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 NOVP48745 357 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 NEK2P51955 445 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 CKAP4Q07065 602 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 P3H1Q32P28 736 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 GKAP1Q5VSY0 366 aaPredicted RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 GIGYF2Q6Y7W6 1299 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF554Q86TJ5 538 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 USHBP1Q8N6Y0 703 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 RSPH1Q8WYR4 309 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 ABHD8Q96I13 439 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 PUS3Q9BZE2 481 aaKnown RBP7.26□□□□□ -1.25
ZNF540-201ENST00000316433 CARD9Q9H257 536 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 TAOK3Q9H2K8 898 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 RMND1Q9NWS8 449 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 SLC4A7Q9Y6M7 1214 aa7.26□□□□□ -1.25
ZNF540-201ENST00000316433 GPAA1O43292 621 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 RANBP6O60518 1105 aaKnown RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 ANXA13P27216 316 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 METAP2P50579 478 aaKnown RBP eCLIP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 ATP2C1P98194 919 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 GSTM4Q03013 218 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 SULT2A1Q06520 285 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 TCERG1LQ5VWI1 586 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 FAAH2Q6GMR7 532 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 CCDC70Q6NSX1 233 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 PEX5LQ8IYB4 626 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 ARFGAP2Q8N6H7 521 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 AZIN2Q96A70 460 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 DUSP9Q99956 384 aaKnown RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 OSBPL10Q9BXB5 764 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 INIPQ9NRY2 104 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 R3HDM2Q9Y2K5 976 aaKnown RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 TESPA1A2RU30 521 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 GOLGA8AA7E2F4 631 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 AKR1B15C9JRZ8 316 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 LDHAP00338 332 aaKnown RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 NQO1P15559 274 aaKnown RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 EEF1GP26641 437 aaKnown RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 TOB1P50616 345 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 EPHB4P54760 987 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 ITGB3BPQ13352 177 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 SPDYCQ5MJ68 293 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 EMBQ6PCB8 327 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 TTC30AQ86WT1 665 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 ZSCAN29Q8IWY8 852 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 UHMK1Q8TAS1 419 aaKnown RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 LPIN2Q92539 896 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 PRCCQ92733 491 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-201ENST00000316433 NACC2Q96BF6 587 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 TTYH3Q9C0H2 523 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 FAM192AQ9GZU8 254 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 THAP9Q9H5L6 903 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 WWC3Q9ULE0 1092 aa7.25□□□□□ -1.25
ZNF540-201ENST00000316433 hCG_2014768A0A024R1R8 64 aa7.24□□□□□ -1.25
ZNF540-201ENST00000316433 PRAMEF22A3QJZ6 481 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms