RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 PALMO75781 387 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 POLR2MP0CAP2 368 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 IL31Q6EBC2 164 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 RWDD4Q6NW29 188 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 FBXL13Q8NEE6 735 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 FMO2Q99518 471 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 USP44Q9H0E7 712 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 GDAQ9Y2T3 454 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PGRMC1O00264 195 aaKnown RBP13.33□□□□□ -0.28
ABCA3-201ENST00000301732 TMPRSS15P98073 1019 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 ARHGAP26Q9UNA1 814 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 THOC5Q13769 683 aaKnown RBP13.33□□□□□ -0.28
ABCA3-201ENST00000301732 CYTH1Q15438 398 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 C1orf146Q5VVC0 180 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 FAM186BQ8IYM0 893 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 HAUS8Q9BT25 410 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 GREM2Q9H772 168 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 SPC25Q9HBM1 224 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 CCPG1Q9ULG6 757 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 WBP4O75554 376 aaKnown RBP13.33□□□□□ -0.28
ABCA3-201ENST00000301732 IL13P35225 146 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 CERKLQ49MI3 558 aaPredicted RBP13.33□□□□□ -0.28
ABCA3-201ENST00000301732 ZNF746Q6NUN9 644 aaPredicted RBP13.33□□□□□ -0.28
ABCA3-201ENST00000301732 DSCC1Q9BVC3 393 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 TLK1Q9UKI8 766 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 KDM3AQ9Y4C1 1321 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 SRGAP2CP0DJJ0 459 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 MCF2P10911 925 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 DLGAP5Q15398 846 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 TBCKQ8TEA7 893 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 GTSE1Q9NYZ3 720 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 MOSPD1Q9UJG1 213 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 ADAM21Q9UKJ8 722 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 HEY1Q9Y5J3 304 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 TRIM66O15016 1216 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 E2F6O75461 281 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 MIGA2Q7L4E1 593 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 LARP4BQ92615 738 aaKnown RBP13.33□□□□□ -0.28
ABCA3-201ENST00000301732 PIGSQ96S52 555 aa13.33□□□□□ -0.28
ABCA3-201ENST00000301732 LONP1P36776 959 aaKnown RBP13.32□□□□□ -0.28
ABCA3-201ENST00000301732 C11orf74Q86VG3 221 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 PIGOQ8TEQ8 1089 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 KIF11P52732 1056 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 MTERF2Q49AM1 385 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 HSP90AA5PQ58FG0 334 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 NFRKBQ6P4R8 1299 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 FAM193BQ96PV7 902 aaPredicted RBP13.32□□□□□ -0.28
ABCA3-201ENST00000301732 TEKT3Q9BXF9 490 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
ABCA3-201ENST00000301732 MCF2LO15068 1137 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 NDUFA10O95299 355 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 ZBTB8OSQ8IWT0 167 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 PYROXD1Q8WU10 500 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 P2RX5Q93086 422 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 ZNF274Q96GC6 653 aaPredicted RBP13.32□□□□□ -0.28
ABCA3-201ENST00000301732 FAM161BQ96MY7 647 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 ZNF577Q9BSK1 485 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 POLR3EQ9NVU0 708 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 SYCE1LA8MT33 242 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 CYP21A2P08686 494 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 SKIP12755 728 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 CTSWP56202 376 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
ABCA3-201ENST00000301732 KLHL11Q9NVR0 708 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 ABCC1P33527 1531 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 ARHGDIAP52565 204 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 NBPF10Q6P3W6 841 aaKnown RBP13.32□□□□□ -0.28
ABCA3-201ENST00000301732 RAB44Q7Z6P3 723 aaPredicted RBP13.32□□□□□ -0.28
ABCA3-201ENST00000301732 ZNF513Q8N8E2 541 aaPredicted RBP13.32□□□□□ -0.28
ABCA3-201ENST00000301732 NT5C1BQ96P26 610 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
ABCA3-201ENST00000301732 HSPA4LO95757 839 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 HNRNPCP07910 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
ABCA3-201ENST00000301732 ATP5JP18859 108 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 LMNB1P20700 586 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 GUCY1A3Q02108 690 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 ECT2Q9H8V3 914 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 ADA2Q9NZK5 511 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 AFF4Q9UHB7 1163 aaKnown RBP13.31□□□□□ -0.28
ABCA3-201ENST00000301732 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 MFAP3P55082 362 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 POU5F1BQ06416 359 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 TERF2Q15554 542 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 MCTP2Q6DN12 878 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
ABCA3-201ENST00000301732 USP17L3A6NCW0 530 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 USP17L4A6NCW7 530 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 ZSCAN9O15535 394 aaPredicted RBP13.31□□□□□ -0.28
ABCA3-201ENST00000301732 MYBL1P10243 752 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 FLOT2Q14254 428 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 BRDTQ58F21 947 aaPredicted RBP13.31□□□□□ -0.28
ABCA3-201ENST00000301732 USP17L1Q7RTZ2 530 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 TMC4Q7Z404 712 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 SYT2Q8N9I0 419 aaPredicted RBP13.31□□□□□ -0.28
ABCA3-201ENST00000301732 HOOK2Q96ED9 719 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 VPS11Q9H270 941 aa13.31□□□□□ -0.28
ABCA3-201ENST00000301732 WDR64B1ANS9 1081 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms