RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 MRPL11Q9Y3B7 192 aaKnown RBP16.14■□□□□ 0.17
SMG8-201ENST00000300917 SAMM50Q9Y512 469 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 CTDP1Q9Y5B0 961 aaPredicted RBP16.14■□□□□ 0.17
SMG8-201ENST00000300917 DUSP10Q9Y6W6 482 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
SMG8-201ENST00000300917 RPA1P27694 616 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 TRIM14Q14142 442 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 GIT2Q14161 759 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 KIAA1328Q86T90 577 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 UBXN4Q92575 508 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 CCDC51Q96ER9 411 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 MBOAT7Q96N66 472 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 RANBP17Q9H2T7 1088 aaKnown RBP16.14■□□□□ 0.17
SMG8-201ENST00000300917 ZNHIT6Q9NWK9 470 aaKnown RBP16.14■□□□□ 0.17
SMG8-201ENST00000300917 RABGAP1Q9Y3P9 1069 aa16.14■□□□□ 0.17
SMG8-201ENST00000300917 GOLGA6L9A6NEM1 432 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 GCNT3O95395 438 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
SMG8-201ENST00000300917 TNIP1Q15025 636 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 MUM1L1Q5H9M0 696 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 PHF20L1A8MW92 1017 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 EHHADHQ08426 723 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 ADAM9Q13443 819 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 GRIPAP1Q4V328 841 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 FAM20AQ96MK3 541 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 TEPSINQ96N21 525 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 WDR11Q9BZH6 1224 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 SH2D4AQ9H788 454 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 WRAP73Q9P2S5 460 aaPredicted RBP16.13■□□□□ 0.17
SMG8-201ENST00000300917 A0A1W2PQC6 194 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 MACROD2A1Z1Q3 448 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 MAN2A1Q16706 1144 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 CEP55Q53EZ4 464 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 ZC2HC1CQ53FD0 456 aaPredicted RBP16.13■□□□□ 0.17
SMG8-201ENST00000300917 TCERG1LQ5VWI1 586 aa16.13■□□□□ 0.17
SMG8-201ENST00000300917 TBCAO75347 108 aaKnown RBP16.12■□□□□ 0.17
SMG8-201ENST00000300917 NMT1P30419 496 aaKnown RBP16.12■□□□□ 0.17
SMG8-201ENST00000300917 TGFB2P61812 414 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 FKBP3Q00688 224 aaKnown RBP16.12■□□□□ 0.17
SMG8-201ENST00000300917 PPP2R3AQ06190 1150 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 CACNA2D4Q7Z3S7 1137 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 DRC1Q96MC2 740 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 NHEJ1Q9H9Q4 299 aaPredicted RBP16.12■□□□□ 0.17
SMG8-201ENST00000300917 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
SMG8-201ENST00000300917 PGAP2Q9UHJ9 254 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 FEM1BQ9UK73 627 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 TMEM150BA6NC51 233 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 RCCD1A6NED2 376 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 NR2F2P24468 414 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 MMP14P50281 582 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 LRRC63Q05C16 580 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 HYIQ5T013 277 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 CCDC122Q5T0U0 273 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 ANGEL2Q5VTE6 544 aaKnown RBP16.12■□□□□ 0.17
SMG8-201ENST00000300917 OTOP1Q7RTM1 612 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 ANKRD13CQ8N6S4 541 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 COL4A3BPQ9Y5P4 624 aa16.12■□□□□ 0.17
SMG8-201ENST00000300917 PEX10O60683 326 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 SLITRK3O94933 977 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 ARHGAP25P42331 645 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 SP4Q02446 784 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 DCAF17Q5H9S7 520 aaPredicted RBP16.11■□□□□ 0.17
SMG8-201ENST00000300917 MYCT1Q8N699 235 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 UNC45AQ9H3U1 944 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 PRDM10Q9NQV6 1147 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 HDAC6Q9UBN7 1215 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 ZNF646O15015 1829 aaPredicted RBP16.11■□□□□ 0.17
SMG8-201ENST00000300917 EPS15P42566 896 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 PSMD2Q13200 908 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 SYT2Q8N9I0 419 aaPredicted RBP16.11■□□□□ 0.17
SMG8-201ENST00000300917 WRNIP1Q96S55 665 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 DNAJC7Q99615 494 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 LACRTQ9GZZ8 138 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 DEF6Q9H4E7 631 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 ARFGEF1Q9Y6D6 1849 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 LRRC53A6NM62 1247 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 IPO5O00410 1097 aaKnown RBP16.11■□□□□ 0.17
SMG8-201ENST00000300917 ITGB5P18084 799 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 CIITAP33076 1130 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 PPP1R2P41236 205 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 HERVK_113P62684 666 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 MOXD1Q6UVY6 613 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 FAM160B2Q86V87 743 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 ZBED3Q96IU2 234 aaPredicted RBP16.11■□□□□ 0.17
SMG8-201ENST00000300917 TTYH3Q9C0H2 523 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
SMG8-201ENST00000300917 ZNF536O15090 1300 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 ZNF541Q9H0D2 1346 aa16.11■□□□□ 0.17
SMG8-201ENST00000300917 TDRD12Q587J7 1177 aaKnown RBP16.1■□□□□ 0.17
SMG8-201ENST00000300917 PRPF38AQ8NAV1 312 aaKnown RBP16.1■□□□□ 0.17
SMG8-201ENST00000300917 ZNF397Q8NF99 534 aaPredicted RBP16.1■□□□□ 0.17
SMG8-201ENST00000300917 MAP7D2Q96T17 732 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 MTFR1LQ9H019 292 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 PCDHB13Q9Y5F0 798 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMG8-201ENST00000300917 PIK3CDO00329 1044 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 TBC1D12O60347 775 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 FGFR1OPO95684 399 aaKnown RBP16.1■□□□□ 0.17
SMG8-201ENST00000300917 VCAM1P19320 739 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms