RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PNMA8AQ86V59 439 aaPredicted RBP19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 BBS5Q8N3I7 341 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 FAM151AQ8WW52 585 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 TOPORSQ9NS56 1045 aaPredicted RBP19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 CPS1P31327 1500 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 ANGEL2Q5VTE6 544 aaKnown RBP19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 ARMCX2Q7L311 632 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 CARD6Q9BX69 1037 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 ARPP19P56211 112 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 ADGRF4Q8IZF3 695 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 C7orf31Q8N865 590 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 GGA3Q9NZ52 723 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 SLC12A6Q9UHW9 1150 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 MAPK6Q16659 721 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 LRRC4Q9HBW1 653 aa19.27■□□□□ 0.68
CDC42EP3-201ENST00000295324 GMPSP49915 693 aaPredicted RBP19.27■□□□□ 0.67
CDC42EP3-201ENST00000295324 AFAP1L2Q8N4X5 818 aa19.27■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZNF512BQ96KM6 892 aaPredicted RBP19.27■□□□□ 0.67
CDC42EP3-201ENST00000295324 UBN2Q6ZU65 1347 aa19.27■□□□□ 0.67
CDC42EP3-201ENST00000295324 PSMC4P43686 418 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 SNAPC2Q13487 334 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 SYNJ2BP-COX16A0A087WUM0 186 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 FAM170AA1A519 330 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 PSMD14O00487 310 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 IKBKBO14920 756 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 WDR46O15213 610 aaKnown RBP19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 ITKQ08881 620 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 DSTYKQ6XUX3 929 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 MICAL1Q8TDZ2 1067 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 COX16Q9P0S2 106 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 SAMD15Q9P1V8 674 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 KCNH4Q9UQ05 1017 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 HYOU1Q9Y4L1 999 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 KCNK3O14649 394 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 MNAT1P51948 309 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 KCNV1Q6PIU1 500 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 NME8Q8N427 588 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 BARHL2Q9NY43 387 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 CCDC6Q16204 474 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 PSPC1Q8WXF1 523 aaKnown RBP19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZNF302Q9NR11 478 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 DDIT3P35638 169 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZNF157P51786 506 aaPredicted RBP19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 TNFAIP2Q03169 654 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 MTMR2Q13614 643 aa19.26■□□□□ 0.67
CDC42EP3-201ENST00000295324 LRRC63Q05C16 580 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 SETDB1Q15047 1291 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 LDHDQ86WU2 507 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 AGBL3Q8NEM8 1001 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 RAET1EQ8TD07 263 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 EPSTI1Q96J88 318 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 GPBP1L1Q9HC44 474 aaPredicted RBP19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 FLT1P17948 1338 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 TOB2Q14106 344 aaPredicted RBP19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 RINT1Q6NUQ1 792 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 RUFY4Q6ZNE9 571 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZNF280CQ8ND82 737 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 FAM76AQ8TAV0 307 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 MTFR1LQ9H019 292 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 RWDD2AQ9UIY3 292 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 SERPINA10Q9UK55 444 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 SBK1Q52WX2 424 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 EPN1Q9Y6I3 576 aaPredicted RBP19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 SMYD4Q8IYR2 804 aaPredicted RBP19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 TEX13BQ9BXU2 312 aa19.25■□□□□ 0.67
CDC42EP3-201ENST00000295324 PFDN6O15212 129 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 P4HBP07237 508 aaKnown RBP19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 ANXA13P27216 316 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 DNAJC21Q5F1R6 531 aaKnown RBP19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 PARK7Q99497 189 aaKnown RBP19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 MAN1B1Q9UKM7 699 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 CSPG5O95196 566 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 CDC42EP5Q6NZY7 148 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 SGMS1Q86VZ5 419 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 PIGOQ8TEQ8 1089 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 GTF3C2Q8WUA4 911 aaPredicted RBP19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZFP91Q96JP5 570 aaPredicted RBP19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 KIAA1586Q9HCI6 787 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 MTMR3Q13615 1198 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 GRAMD1CQ8IYS0 662 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 KDM6AO15550 1401 aaPredicted RBP19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 TCP1P17987 556 aaKnown RBP19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 QARSP47897 775 aaKnown RBP19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 PADI6Q6TGC4 694 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 PAGE5Q96GU1 130 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 FBXO33Q7Z6M2 555 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 THNSL1Q8IYQ7 743 aa19.24■□□□□ 0.67
CDC42EP3-201ENST00000295324 CLDN3O15551 220 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 TWF2Q6IBS0 349 aaKnown RBP19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 GCNAQ96QF7 691 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 MYOZ2Q9NPC6 264 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 MTMR4Q9NYA4 1195 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 NYAP2Q9P242 653 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 KRIT1O00522 736 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 BFSP1Q12934 665 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 TKFCQ3LXA3 575 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 SPDYE2Q495Y8 402 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 SPATA33Q96N06 139 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 C2orf40Q9H1Z8 148 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms