RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 CASP5P51878 434 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 AMPD3Q01432 767 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 HERC4Q5GLZ8 1057 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-201ENST00000282841 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
GGPS1-201ENST00000282841 GPIHBP1Q8IV16 184 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 KSR1Q8IVT5 923 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
GGPS1-201ENST00000282841 PANK4Q9NVE7 773 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 DNM3Q9UQ16 869 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 SPDYE5A6NIY4 337 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 RGS20O76081 388 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 RPA1P27694 616 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 SLC12A3P55017 1021 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 HERVK_113P62684 666 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 PPATQ06203 517 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 ZC3H15Q8WU90 426 aaKnown RBP12.23□□□□□ -0.45
GGPS1-201ENST00000282841 SEMA6BQ9H3T3 888 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 A0A0G2JLL6 359 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-201ENST00000282841 DHX15O43143 795 aaKnown RBP12.23□□□□□ -0.45
GGPS1-201ENST00000282841 COASYQ13057 564 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 SH3D19Q5HYK7 790 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 CEP135Q66GS9 1140 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 HAUS3Q68CZ6 603 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 ARMC9Q7Z3E5 817 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 PRRT2Q7Z6L0 340 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-201ENST00000282841 IRF2BP1Q8IU81 584 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 HSD17B14Q9BPX1 270 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 REEP2Q9BRK0 252 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 CUEDC2Q9H467 287 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 ACAD9Q9H845 621 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 EHMT1Q9H9B1 1298 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 RPTORQ8N122 1335 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 PARP14Q460N5 1801 aa12.23□□□□□ -0.45
GGPS1-201ENST00000282841 TBX3O15119 743 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 CELF2O95319 508 aaKnown RBP12.22□□□□□ -0.45
GGPS1-201ENST00000282841 UGCGQ16739 394 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
GGPS1-201ENST00000282841 PCNX4Q63HM2 1172 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 MCTP2Q6DN12 878 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 LBX2Q6XYB7 198 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 ERMNQ8TAM6 284 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 LXNQ9BS40 222 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 TEKT3Q9BXF9 490 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 NT5C3AQ9H0P0 336 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 AGO4Q9HCK5 861 aaKnown RBP12.22□□□□□ -0.45
GGPS1-201ENST00000282841 CCNE2O96020 404 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 ADKP55263 362 aaKnown RBP12.22□□□□□ -0.45
GGPS1-201ENST00000282841 FAM193AP78312 1265 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 KCNA1Q09470 495 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 SEMA3FQ13275 785 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 MOGSQ13724 837 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 KRT31Q15323 416 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 ARMCX5Q6P1M9 558 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 SEPT14Q6ZU15 432 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 UNC13DQ70J99 1090 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 APTXQ7Z2E3 356 aaKnown RBP12.22□□□□□ -0.45
GGPS1-201ENST00000282841 PNMA8AQ86V59 439 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-201ENST00000282841 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
GGPS1-201ENST00000282841 MOV10L1Q9BXT6 1211 aaKnown RBP12.22□□□□□ -0.45
GGPS1-201ENST00000282841 RWDD2AQ9UIY3 292 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 RABGAP1Q9Y3P9 1069 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 UBIAD1Q9Y5Z9 338 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 PTPRFP10586 1907 aa12.22□□□□□ -0.45
GGPS1-201ENST00000282841 GOLGA6L6A8MZA4 724 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 MYCNP04198 464 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-201ENST00000282841 KCNB1Q14721 858 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 MIER3Q7Z3K6 550 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 CSGALNACT2Q8N6G5 542 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 SPATC1LQ9H0A9 340 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 JADE2Q9NQC1 790 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 RBPJLQ9UBG7 517 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 HTTP42858 3142 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 KDM3AQ9Y4C1 1321 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 KCNJ18B7U540 433 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 PSMA7O14818 248 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 SP2Q02086 613 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 TMEM63BQ5T3F8 832 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 LRRC8AQ8IWT6 810 aa12.21□□□□□ -0.45
GGPS1-201ENST00000282841 DOCK5Q9H7D0 1870 aa12.21□□□□□ -0.46
GGPS1-201ENST00000282841 PPP2R5CQ13362 524 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 GIT2Q14161 759 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 HYIQ5T013 277 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 CDKAL1Q5VV42 579 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 PLA2G4FQ68DD2 849 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 GPAT2Q6NUI2 795 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 TTI2Q6NXR4 508 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 VSIG10LQ86VR7 867 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 SFR1Q86XK3 245 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 PORCNQ9H237 461 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 WDR90Q96KV7 1748 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 CNMDO75829 334 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 NPEPPSP55786 919 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 SOX10P56693 466 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 GRM1Q13255 1194 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 CNNM4Q6P4Q7 775 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-201ENST00000282841 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
GGPS1-201ENST00000282841 P2RX5Q93086 422 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms