RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 UBOX5O94941 541 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 EYA4O95677 639 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 ENDOUP21128 410 aaKnown RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 CASP7P55210 303 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 NMIQ13287 307 aaPredicted RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 CDC37Q16543 378 aaPredicted RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 TBC1D10BQ4KMP7 808 aaPredicted RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 CWF19L1Q69YN2 538 aaKnown RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 MMS22LQ6ZRQ5 1243 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 NECAB2Q7Z6G3 386 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 ANKRD23Q86SG2 305 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 ZNF354CQ86Y25 554 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 ZSWIM2Q8NEG5 633 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 CHMP4CQ96CF2 233 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 SLC9A7Q96T83 725 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 ALDH8A1Q9H2A2 487 aaPredicted RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 RETREG1Q9H6L5 497 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 PHAXQ9H814 394 aaKnown RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 AASDHPPTQ9NRN7 309 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 ACTR10Q9NZ32 417 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 SUCOQ9UBS9 1254 aaKnown RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 HDAC9Q9UKV0 1011 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 MAPRE3Q9UPY8 281 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 IPPQ9Y573 584 aa5.5□□□□□ -1.53
CD44-202ENST00000278385 NKTRP30414 1462 aaKnown RBP5.5□□□□□ -1.53
CD44-202ENST00000278385 TMEM131LA2VDJ0 1609 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 ANO9A1A5B4 782 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 GSG1L2A8MUP6 293 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 PIP5K1CO60331 668 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 LRRN2O75325 713 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 RFPL3O75679 317 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 CT47B1P0C2W7 299 aaPredicted RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 NAT2P11245 290 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 TYRP1P17643 537 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 SERPINB3P29508 390 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 DDIT3P35638 169 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 CD96P40200 585 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 PMS1P54277 932 aaKnown RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 PCBP3P57721 371 aaKnown RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 GPSM2P81274 684 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 MTMR1Q13613 665 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 PUM3Q15397 648 aaKnown RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 ZNF792Q3KQV3 632 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 GNPTABQ3T906 1256 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 TOGARAM2Q6ZUX3 1019 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 SPATC1Q76KD6 591 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 TSPYL5Q86VY4 417 aaPredicted RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 ZSCAN30Q86W11 494 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 LSRQ86X29 649 aaPredicted RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 Q96M66 194 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 ALPK1Q96QP1 1244 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 ELAC2Q9BQ52 826 aaKnown RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 SEMA3GQ9NS98 782 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 CWC25Q9NXE8 425 aaPredicted RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 PFDN2Q9UHV9 154 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 EVLQ9UI08 416 aaPredicted RBP5.49□□□□□ -1.53
CD44-202ENST00000278385 ZNF180Q9UJW8 692 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 SLC45A1Q9Y2W3 748 aa5.49□□□□□ -1.53
CD44-202ENST00000278385 CNTNAP4Q9C0A0 1308 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 SETD5Q9C0A6 1442 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 CFAP65Q6ZU64 1925 aaKnown RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 GCC2Q8IWJ2 1684 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 VSTM5A8MXK1 200 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 FAM200BP0CF97 657 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 CPEP16870 476 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 AFMP43652 599 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 GIPRP48546 466 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 EGR3Q06889 387 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 SSRP1Q08945 709 aaKnown RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 DUSP4Q13115 394 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.53
CD44-202ENST00000278385 AUHQ13825 339 aaKnown RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 KRT72Q14CN4 511 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 FXNQ16595 210 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 NBPF9Q3BBW0 867 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 RGL3Q3MIN7 710 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 TMEM67Q5HYA8 995 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 XP32Q5T750 250 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 TTLL5Q6EMB2 1281 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 PPP4R3AQ6IN85 833 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 CXorf57Q6NSI4 855 aaKnown RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 UNC5AQ6ZN44 842 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 ZBTB46Q86UZ6 589 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 FTSJ3Q8IY81 847 aaKnown RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 IFNL2Q8IZJ0 200 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 OXR1Q8N573 874 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 ZNF655Q8N720 491 aaPredicted RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 C19orf47Q8N9M1 422 aaKnown RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 SYTL5Q8TDW5 730 aaPredicted RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 ASIC4Q96FT7 647 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 SCLT1Q96NL6 688 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 SERINC2Q96SA4 455 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 SMAD5Q99717 465 aaKnown RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 GBP3Q9H0R5 595 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 CSRNP2Q9H175 543 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 DUSP15Q9H1R2 295 aaPredicted RBP5.48□□□□□ -1.53
CD44-202ENST00000278385 PRDM11Q9NQV5 511 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 SLAMF8Q9P0V8 285 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 PGAP2Q9UHJ9 254 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 ZMYM5Q9UJ78 669 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms