RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 ZNF653Q96CK0 615 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 XAGE2Q96GT9 111 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 DBNDD2Q9BQY9 259 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 ARHGAP26Q9UNA1 814 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 PRAG1Q86YV5 1406 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 MAP3K5Q99683 1374 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 TRIM66O15016 1216 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 KCNA3P22001 575 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 BASP1P80723 227 aaKnown RBP11.37□□□□□ -0.59
OTOF-201ENST00000272371 CYLC2Q14093 348 aaPredicted RBP11.37□□□□□ -0.59
OTOF-201ENST00000272371 PCGF5Q86SE9 256 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 RASSF3Q86WH2 238 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 SMCR8Q8TEV9 937 aaPredicted RBP11.37□□□□□ -0.59
OTOF-201ENST00000272371 SKA2Q8WVK7 121 aaPredicted RBP11.37□□□□□ -0.59
OTOF-201ENST00000272371 TGS1Q96RS0 853 aaKnown RBP11.37□□□□□ -0.59
OTOF-201ENST00000272371 K7ENM7 598 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 CAPN9O14815 690 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 HSPA4LO95757 839 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 OATP04181 439 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 PIK3CAP42336 1068 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 CENPUQ71F23 418 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 CATSPER1Q8NEC5 780 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 MED10Q9BTT4 135 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 FAM135BQ49AJ0 1406 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 KITP10721 976 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 LTKP29376 864 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 USH1GQ495M9 461 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.37□□□□□ -0.59
OTOF-201ENST00000272371 L3MBTL1Q9Y468 752 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 SHANK2Q9UPX8 1470 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 STK25O00506 426 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 SERPINB2P05120 415 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 CYP2C19P33261 490 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 YARSP54577 528 aaKnown RBP11.37□□□□□ -0.59
OTOF-201ENST00000272371 AP1B1Q10567 949 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 NEK8Q86SG6 692 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 BLIDQ8IZY5 108 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 PYROXD1Q8WU10 500 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 ZCCHC17Q9NP64 241 aaKnown RBP11.37□□□□□ -0.59
OTOF-201ENST00000272371 TRIM33Q9UPN9 1127 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 PCDHA5Q9Y5H7 936 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 SMCO2A6NFE2 343 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 RASA4BC9J798 803 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 RASA4O43374 803 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 MFAP3P55082 362 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 FAM102BQ5T8I3 360 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 DDX42Q86XP3 938 aaKnown RBP eCLIP11.37□□□□□ -0.59
OTOF-201ENST00000272371 SLC26A7Q8TE54 656 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 MAGEF1Q9HAY2 307 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 CSADQ9Y600 493 aa11.37□□□□□ -0.59
OTOF-201ENST00000272371 MEFVO15553 781 aaPredicted RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 MTHFSDQ2M296 383 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 TOGARAM2Q6ZUX3 1019 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 ADCK1Q86TW2 530 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 DHTKD1Q96HY7 919 aaPredicted RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 DIAPH2O60879 1101 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 OR52Z1P0C646 297 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 EIF4A3P38919 411 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 ZNF658Q5TYW1 1059 aaPredicted RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 RFX8Q6ZV50 586 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 BZW1Q7L1Q6 419 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 FAM133AQ8N9E0 248 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 KIF17Q9P2E2 1029 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 RNF103-CHMP3A0A140T963 221 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 KRT1P04264 644 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 PUM3Q15397 648 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 DIABLOQ9NR28 239 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 TCOF1Q13428 1488 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 A0A1B0GW55 424 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 PODXLO00592 558 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 CTIFO43310 598 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 DUX4L2P0CJ85 424 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 DUX4L3P0CJ86 424 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 DUX4L4P0CJ87 422 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 DUX4L5P0CJ88 424 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 DUX4L6P0CJ89 424 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 DUX4L7P0CJ90 424 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 MAP4P27816 1152 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 HOXC9P31274 260 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 ZC3H12BQ5HYM0 836 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 CALR3Q96L12 384 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 DUX4Q9UBX2 424 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 PALD1Q9ULE6 856 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 ADCY9O60503 1353 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 PCDH11XQ9BZA7 1347 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 PCDH11YQ9BZA8 1340 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 AFPP02771 609 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 MRPS25P82663 173 aaKnown RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 ZBTB33Q86T24 672 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 SMYD4Q8IYR2 804 aaPredicted RBP11.36□□□□□ -0.59
OTOF-201ENST00000272371 COG4Q9H9E3 785 aa11.36□□□□□ -0.59
OTOF-201ENST00000272371 PTK2Q05397 1052 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms