RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 ARHGEF1Q92888 912 aaKnown RBP18.57■□□□□ 0.56
RTN1-201ENST00000267484 CD209Q9NNX6 404 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 MAST2Q6P0Q8 1798 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 INPP5BP32019 993 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 LSP1P33241 339 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 ASIC2Q16515 512 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 MTMR4Q9NYA4 1195 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 PLAAQ9Y263 795 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 GPR75-ASB3A0A0A6YYF3 556 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 TNFRSF8P28908 595 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 ERVK-9P63128 1117 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 KCNH2Q12809 1159 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 GLE1Q53GS7 698 aaKnown RBP18.56■□□□□ 0.56
RTN1-201ENST00000267484 MEIS1O00470 390 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 CEP104O60308 925 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 PLA2G4BP0C869 781 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 NR1D1P20393 614 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 PSMD2Q13200 908 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 RUBCNQ92622 972 aa18.56■□□□□ 0.56
RTN1-201ENST00000267484 USP17L10C9JJH3 530 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 KRT18P05783 430 aaKnown RBP18.55■□□□□ 0.56
RTN1-201ENST00000267484 ZNF571Q7Z3V5 609 aaPredicted RBP18.55■□□□□ 0.56
RTN1-201ENST00000267484 PROM2Q8N271 834 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 USP38Q8NB14 1042 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 EMILIN3Q9NT22 766 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 TSKSQ9UJT2 592 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 PCDHGC5Q9Y5F6 944 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 POTEFA5A3E0 1075 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 BACH1O14867 736 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 CPP00450 1065 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 GRAPQ13588 217 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 CDC37Q16543 378 aaPredicted RBP18.55■□□□□ 0.56
RTN1-201ENST00000267484 POTEGQ6S5H5 508 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 POTEEQ6S8J3 1075 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 GRAPLQ8TC17 118 aaPredicted RBP18.55■□□□□ 0.56
RTN1-201ENST00000267484 PCDHA2Q9Y5H9 948 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 CAPN7Q9Y6W3 813 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 STRCQ7RTU9 1775 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 MYO1FO00160 1098 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 NEUROG2Q9H2A3 272 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 GANQ9H2C0 597 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 LEMD3Q9Y2U8 911 aa18.55■□□□□ 0.56
RTN1-201ENST00000267484 EDEM3Q9BZQ6 932 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 DDX47Q9H0S4 455 aaKnown RBP18.54■□□□□ 0.56
RTN1-201ENST00000267484 KCTD10Q9H3F6 313 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 BMP2KQ9NSY1 1161 aaPredicted RBP18.54■□□□□ 0.56
RTN1-201ENST00000267484 RPS6KA4O75676 772 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 NR2F2P24468 414 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 RPS6KA1Q15418 735 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 GJB7Q6PEY0 223 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 TAF4BQ92750 862 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 AJAP1Q9UKB5 411 aaPredicted RBP18.54■□□□□ 0.56
RTN1-201ENST00000267484 SPATA31A5Q5VU36 1347 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 SPATA31A7Q8IWB4 1347 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 FLT3P36888 993 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 PSMC6P62333 389 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 HDLBPQ00341 1268 aaKnown RBP18.54■□□□□ 0.56
RTN1-201ENST00000267484 DCAF17Q5H9S7 520 aaPredicted RBP18.54■□□□□ 0.56
RTN1-201ENST00000267484 NAA35Q5VZE5 725 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 KCNV1Q6PIU1 500 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 IKZF4Q9H2S9 585 aa18.54■□□□□ 0.56
RTN1-201ENST00000267484 PPANQ9NQ55 473 aaKnown RBP18.54■□□□□ 0.56
RTN1-201ENST00000267484 BCCIPQ9P287 314 aaKnown RBP eCLIP18.54■□□□□ 0.56
RTN1-201ENST00000267484 THRAP3Q9Y2W1 955 aaKnown RBP18.54■□□□□ 0.56
RTN1-201ENST00000267484 TMCO5BA8MYB1 307 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 MED24O75448 989 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 CYP11B2P19099 503 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 SPAG5Q96R06 1193 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 WNK3Q9BYP7 1800 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 ITGA4P13612 1032 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 ARSHQ5FYA8 562 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 KDM7AQ6ZMT4 941 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 CCDC65Q8IXS2 484 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 ATP6V1G3Q96LB4 118 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 LUC7LQ9NQ29 371 aaKnown RBP18.53■□□□□ 0.56
RTN1-201ENST00000267484 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
RTN1-201ENST00000267484 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
RTN1-201ENST00000267484 MPHOSPH10O00566 681 aaKnown RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 TAL1P17542 331 aaPredicted RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 SNAP25P60880 206 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 TCERG1LQ5VWI1 586 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 MMS22LQ6ZRQ5 1243 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 PSTPIP2Q9H939 334 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 CNTNAP4Q9C0A0 1308 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 COL5A3P25940 1745 aaPredicted RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 ECHS1P30084 290 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 HNRNPH1P31943 449 aaKnown RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 RFC4P35249 363 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 ORC2Q13416 577 aaPredicted RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 SHROOM1Q2M3G4 852 aaPredicted RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 IRF2BP2Q7Z5L9 587 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 RBM46Q8TBY0 533 aaKnown RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 SYN2Q92777 582 aaPredicted RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 LRRC4CQ9HCJ2 640 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 DDX4Q9NQI0 724 aaKnown RBP18.52■□□□□ 0.56
RTN1-201ENST00000267484 RNF14Q9UBS8 474 aa18.52■□□□□ 0.56
RTN1-201ENST00000267484 TNRC6CQ9HCJ0 1690 aaKnown RBP18.52■□□□□ 0.55
RTN1-201ENST00000267484 PNMA6FA0A0J9YX94 578 aa18.52■□□□□ 0.55
RTN1-201ENST00000267484 HSD17B3P37058 310 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms