RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 TFR2Q9UP52 801 aa15.06■□□□□ 0
VMP1-201ENST00000262291 DNM3Q9UQ16 869 aa15.06■□□□□ 0
VMP1-201ENST00000262291 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.06■□□□□ 0
VMP1-201ENST00000262291 RASSF10A6NK89 507 aa15.06■□□□□ 0
VMP1-201ENST00000262291 PEX10O60683 326 aa15.06■□□□□ 0
VMP1-201ENST00000262291 ICAM1P05362 532 aa15.06■□□□□ 0
VMP1-201ENST00000262291 EIF2AK2P19525 551 aaKnown RBP15.06■□□□□ 0
VMP1-201ENST00000262291 HIRAP54198 1017 aaPredicted RBP15.06■□□□□ 0
VMP1-201ENST00000262291 HMGCS2P54868 508 aa15.06■□□□□ 0
VMP1-201ENST00000262291 ZNF397Q8NF99 534 aaPredicted RBP15.06■□□□□ 0
VMP1-201ENST00000262291 CLEC4DQ8WXI8 215 aa15.06■□□□□ 0
VMP1-201ENST00000262291 WDR24Q96S15 920 aa15.06■□□□□ 0
VMP1-201ENST00000262291 ZNF577Q9BSK1 485 aa15.06■□□□□ 0
VMP1-201ENST00000262291 WDR11Q9BZH6 1224 aa15.06■□□□□ 0
VMP1-201ENST00000262291 KCND1Q9NSA2 647 aa15.06■□□□□ 0
VMP1-201ENST00000262291 PAXBP1Q9Y5B6 917 aa15.06■□□□□ 0
VMP1-201ENST00000262291 TRAF5O00463 557 aa15.05■□□□□ 0
VMP1-201ENST00000262291 CTNND1O60716 968 aaKnown RBP15.05■□□□□ 0
VMP1-201ENST00000262291 GAS7O60861 476 aa15.05■□□□□ 0
VMP1-201ENST00000262291 CYP3A4P08684 503 aa15.05■□□□□ 0
VMP1-201ENST00000262291 RPA1P27694 616 aa15.05■□□□□ 0
VMP1-201ENST00000262291 CEP55Q53EZ4 464 aa15.05■□□□□ 0
VMP1-201ENST00000262291 OTOP1Q7RTM1 612 aa15.05■□□□□ 0
VMP1-201ENST00000262291 SFR1Q86XK3 245 aa15.05■□□□□ 0
VMP1-201ENST00000262291 CCDC65Q8IXS2 484 aa15.05■□□□□ 0
VMP1-201ENST00000262291 GUF1Q8N442 669 aaKnown RBP15.05■□□□□ 0
VMP1-201ENST00000262291 ATG4CQ96DT6 458 aa15.05■□□□□ 0
VMP1-201ENST00000262291 SH2D3AQ9BRG2 576 aa15.05■□□□□ 0
VMP1-201ENST00000262291 WRAP73Q9P2S5 460 aaPredicted RBP15.05■□□□□ 0
VMP1-201ENST00000262291 FEZ2Q9UHY8 353 aaPredicted RBP15.05■□□□□ 0
VMP1-201ENST00000262291 ZHX2Q9Y6X8 837 aa15.05■□□□□ 0
VMP1-201ENST00000262291 ITGB5P18084 799 aa15.05■□□□□ -0
VMP1-201ENST00000262291 GNG11P61952 73 aa15.05■□□□□ -0
VMP1-201ENST00000262291 GIT2Q14161 759 aa15.05■□□□□ -0
VMP1-201ENST00000262291 NSMFQ6X4W1 530 aa15.05■□□□□ -0
VMP1-201ENST00000262291 CNGA4Q8IV77 575 aa15.05■□□□□ -0
VMP1-201ENST00000262291 BANK1Q8NDB2 785 aa15.05■□□□□ -0
VMP1-201ENST00000262291 KIAA1683Q9H0B3 1180 aa15.05■□□□□ -0
VMP1-201ENST00000262291 RIPK3Q9Y572 518 aa15.05■□□□□ -0
VMP1-201ENST00000262291 CTDP1Q9Y5B0 961 aaPredicted RBP15.05■□□□□ -0
VMP1-201ENST00000262291 ITIH6Q6UXX5 1313 aa15.05■□□□□ -0
VMP1-201ENST00000262291 TBX3O15119 743 aa15.04■□□□□ -0
VMP1-201ENST00000262291 WDR46O15213 610 aaKnown RBP15.04■□□□□ -0
VMP1-201ENST00000262291 ZSCAN12O43309 604 aa15.04■□□□□ -0
VMP1-201ENST00000262291 KCNJ6P48051 423 aa15.04■□□□□ -0
VMP1-201ENST00000262291 SCFD1Q8WVM8 642 aa15.04■□□□□ -0
VMP1-201ENST00000262291 LRRC27Q9C0I9 530 aa15.04■□□□□ -0
VMP1-201ENST00000262291 UNC45AQ9H3U1 944 aa15.04■□□□□ -0
VMP1-201ENST00000262291 FAM207AQ9NSI2 230 aaPredicted RBP15.04■□□□□ -0
VMP1-201ENST00000262291 PCDHA2Q9Y5H9 948 aa15.04■□□□□ -0
VMP1-201ENST00000262291 EPHB6O15197 1021 aa15.04■□□□□ -0
VMP1-201ENST00000262291 PRPF6O94906 941 aaKnown RBP15.04■□□□□ -0
VMP1-201ENST00000262291 MYBP10242 640 aa15.04■□□□□ -0
VMP1-201ENST00000262291 MYCLP12524 364 aaPredicted RBP15.04■□□□□ -0
VMP1-201ENST00000262291 TRIM21P19474 475 aaKnown RBP15.04■□□□□ -0
VMP1-201ENST00000262291 ETF1P62495 437 aaKnown RBP15.04■□□□□ -0
VMP1-201ENST00000262291 LRRC55Q6ZSA7 311 aa15.04■□□□□ -0
VMP1-201ENST00000262291 MAEAQ7L5Y9 396 aa15.04■□□□□ -0
VMP1-201ENST00000262291 KSR1Q8IVT5 923 aa15.04■□□□□ -0
VMP1-201ENST00000262291 SMCR8Q8TEV9 937 aaPredicted RBP15.04■□□□□ -0
VMP1-201ENST00000262291 NOC3LQ8WTT2 800 aaKnown RBP15.04■□□□□ -0
VMP1-201ENST00000262291 TAAR1Q96RJ0 339 aa15.04■□□□□ -0
VMP1-201ENST00000262291 ZNF446Q9NWS9 450 aa15.04■□□□□ -0
VMP1-201ENST00000262291 ADGRG1Q9Y653 693 aa15.04■□□□□ -0
VMP1-201ENST00000262291 SORBS3O60504 671 aa15.03■□□□□ -0
VMP1-201ENST00000262291 PSMD10O75832 226 aa15.03■□□□□ -0
VMP1-201ENST00000262291 DDNO94850 711 aaPredicted RBP15.03■□□□□ -0
VMP1-201ENST00000262291 SLITRK3O94933 977 aa15.03■□□□□ -0
VMP1-201ENST00000262291 APBA1Q02410 837 aa15.03■□□□□ -0
VMP1-201ENST00000262291 KCNA1Q09470 495 aa15.03■□□□□ -0
VMP1-201ENST00000262291 MCTP2Q6DN12 878 aa15.03■□□□□ -0
VMP1-201ENST00000262291 RABGAP1Q9Y3P9 1069 aa15.03■□□□□ -0
VMP1-201ENST00000262291 URI1O94763 535 aaPredicted RBP15.03■□□□□ -0
VMP1-201ENST00000262291 DNM2P50570 870 aa15.03■□□□□ -0
VMP1-201ENST00000262291 PICK1Q9NRD5 415 aa15.03■□□□□ -0
VMP1-201ENST00000262291 LUC7L2Q9Y383 392 aaKnown RBP15.03■□□□□ -0
VMP1-201ENST00000262291 IPO5O00410 1097 aaKnown RBP15.02■□□□□ -0
VMP1-201ENST00000262291 PLA2G6O60733 806 aa15.02■□□□□ -0
VMP1-201ENST00000262291 PTPRAP18433 802 aa15.02■□□□□ -0
VMP1-201ENST00000262291 TNNT3P45378 269 aaPredicted RBP15.02■□□□□ -0
VMP1-201ENST00000262291 FAM114A1Q8IWE2 563 aa15.02■□□□□ -0
VMP1-201ENST00000262291 SYT2Q8N9I0 419 aaPredicted RBP15.02■□□□□ -0
VMP1-201ENST00000262291 NEK11Q8NG66 645 aa15.02■□□□□ -0
VMP1-201ENST00000262291 SLC5A5Q92911 643 aa15.02■□□□□ -0
VMP1-201ENST00000262291 TSG101Q99816 390 aa15.02■□□□□ -0
VMP1-201ENST00000262291 SLC38A10Q9HBR0 1119 aa15.02■□□□□ -0
VMP1-201ENST00000262291 GPRC5DQ9NZD1 345 aa15.02■□□□□ -0
VMP1-201ENST00000262291 PPP1R9AQ9ULJ8 1098 aa15.02■□□□□ -0
VMP1-201ENST00000262291 CCDC175P0C221 793 aa15.02□□□□□ -0.01
VMP1-201ENST00000262291 RPS6P62753 249 aaKnown RBP15.02□□□□□ -0.01
VMP1-201ENST00000262291 PSMD2Q13200 908 aa15.02□□□□□ -0.01
VMP1-201ENST00000262291 CCDC40Q4G0X9 1142 aa15.02□□□□□ -0.01
VMP1-201ENST00000262291 VWA3BQ502W6 1294 aa15.02□□□□□ -0.01
VMP1-201ENST00000262291 SCYL3Q8IZE3 742 aa15.02□□□□□ -0.01
VMP1-201ENST00000262291 CRACR2AQ9BSW2 395 aa15.02□□□□□ -0.01
VMP1-201ENST00000262291 MMRN2Q9H8L6 949 aa15.02□□□□□ -0.01
VMP1-201ENST00000262291 TRIM10Q9UDY6 481 aa15.02□□□□□ -0.01
VMP1-201ENST00000262291 POLR2AP24928 1970 aaKnown RBP15.02□□□□□ -0.01
VMP1-201ENST00000262291 TMEM150BA6NC51 233 aa15.01□□□□□ -0.01
VMP1-201ENST00000262291 HSD17B4P51659 736 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms