RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 PAK1Q13153 545 aa14.06□□□□□ -0.16
TMEM260-201ENST00000261556 PTF1AQ7RTS3 328 aa14.06□□□□□ -0.16
TMEM260-201ENST00000261556 DDX42Q86XP3 938 aaKnown RBP eCLIP14.06□□□□□ -0.16
TMEM260-201ENST00000261556 RBM12Q9NTZ6 932 aaKnown RBP14.06□□□□□ -0.16
TMEM260-201ENST00000261556 ZNF335Q9H4Z2 1342 aaPredicted RBP14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ANKRD33BA6NCL7 494 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ZSCAN9O15535 394 aaPredicted RBP14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ATP9AO75110 1047 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 GYG1P46976 350 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 CTSWP56202 376 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 BIRC3Q13489 604 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 CRELD2Q6UXH1 353 aaPredicted RBP14.05□□□□□ -0.16
TMEM260-201ENST00000261556 NELFBQ8WX92 580 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 MAP4K1Q92918 833 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ABHD8Q96I13 439 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ABCF3Q9NUQ8 709 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ADCY10Q96PN6 1610 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 KRIT1O00522 736 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 FAM153BP0C7A2 387 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 CLCN2P51788 898 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 FAM153CQ494X1 144 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 LRRC43Q8N309 656 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 MPP4Q96JB8 637 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 QTRT2Q9H974 415 aaKnown RBP14.05□□□□□ -0.16
TMEM260-201ENST00000261556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■■■■ 28.3
TMEM260-201ENST00000261556 FAM153AQ9UHL3 310 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 STK10O94804 968 aaKnown RBP14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ADARP55265 1226 aaKnown RBP14.05□□□□□ -0.16
TMEM260-201ENST00000261556 XRCC4Q13426 336 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 PRKG1Q13976 671 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ZNF174Q15697 407 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 TRAPPC11Q7Z392 1133 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 MAGEC3Q8TD91 643 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 VTI1AQ96AJ9 217 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 NOC4LQ9BVI4 516 aaKnown RBP14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ZNF408Q9H9D4 720 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 DUSP10Q9Y6W6 482 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 MROH5Q6ZUA9 1318 aa14.05□□□□□ -0.16
TMEM260-201ENST00000261556 ARHGEF5Q12774 1597 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 CYLC2Q14093 348 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 RPS6KA1Q15418 735 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 KRT40Q6A162 431 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 ISLR2Q6UXK2 745 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 LZTS2Q9BRK4 669 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 CCDC169A6NNP5 214 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 CCNFP41002 786 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 CTDSPL2Q05D32 466 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 MORC3Q14149 939 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 LRRC24Q50LG9 513 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 MFSD14BQ5SR56 506 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 RRAGAQ7L523 313 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 ATP6V0A1Q93050 837 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 PLEKHF1Q96S99 279 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 FGFR1OP2Q9NVK5 253 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 MTRF1LQ9UGC7 380 aaKnown RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 TAF6LQ9Y6J9 622 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 TTC37Q6PGP7 1564 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 EFCAB6Q5THR3 1501 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 PRAMEF22A3QJZ6 481 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 P4HA2O15460 535 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 MGRN1O60291 552 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 CCDC15Q0P6D6 951 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 ST3GAL1Q11201 340 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 SLC39A14Q15043 492 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 USPL1Q5W0Q7 1092 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 ZNF589Q86UQ0 364 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 FAM228AQ86W67 206 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 ZBTB38Q8NAP3 1195 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 NHEJ1Q9H9Q4 299 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 PLCB1Q9NQ66 1216 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 PKD2L1Q9P0L9 805 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 PACSIN2Q9UNF0 486 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 RABL2BQ9UNT1 228 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 TRIM33Q9UPN9 1127 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 NPHP4O75161 1426 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 TRIM43BA6NCK2 446 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 TCP11X1B4DZS4 312 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 COPS2P61201 443 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 TBL3Q12788 808 aaKnown RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 KRT31Q15323 416 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 HSP90AA5PQ58FG0 334 aa14.04□□□□□ -0.16
TMEM260-201ENST00000261556 GET4Q7L5D6 327 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-201ENST00000261556 MLH3Q9UHC1 1453 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 ZMYM6O95789 1325 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 IGSF1Q8N6C5 1336 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 USP17L12C9JPN9 530 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 USP17L21D6R901 530 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 SMAPO00193 183 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 CYP11B2P19099 503 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 TGFBRAP1Q8WUH2 860 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 DNAI2Q9GZS0 605 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 hCG_1642624A0A1W2PR95 340 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 NFKBIAP25963 317 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 PLTPP55058 493 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 TMEM62Q0P6H9 643 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 ANO5Q75V66 913 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 CCNJLQ8IV13 435 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 DIS3L2Q8IYB7 885 aaKnown RBP14.03□□□□□ -0.16
TMEM260-201ENST00000261556 CCDC110Q8TBZ0 833 aa14.03□□□□□ -0.16
TMEM260-201ENST00000261556 AIFM3Q96NN9 605 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms