RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 GDAP1L1Q96MZ0 367 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 TSPAN18Q96SJ8 248 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 CCSER1Q9C0I3 900 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 OLFML3Q9NRN5 406 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L5A8MUK1 530 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 GSPT1P15170 499 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 LONRF3Q496Y0 759 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 CD302Q8IX05 232 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 POMGNT1Q8WZA1 660 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 KMT5AQ9NQR1 393 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 ADAMTS13Q76LX8 1427 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 TMEM232C9JQI7 657 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SLC1A1P43005 524 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 PRELPP51888 382 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 IL9RQ01113 521 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 PALM2Q8IXS6 379 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 PRPF38AQ8NAV1 312 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SYMPKQ92797 1274 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 MKNK1Q9BUB5 465 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 DISC1Q9NRI5 854 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 VPS54Q9P1Q0 977 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 KIF23Q02241 960 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 KLC3Q6P597 504 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 FRMD5Q7Z6J6 570 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 THEM5Q8N1Q8 247 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 AGBL3Q8NEM8 1001 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 MCUR1Q96AQ8 359 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 STRBPQ96SI9 672 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 TRIM15Q9C019 465 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 KPNA6O60684 536 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 RFC5P40937 340 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 BCAMP50895 628 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 MXD4Q14582 209 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 PCBP1Q15365 356 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 ABI1Q8IZP0 508 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 GUF1Q8N442 669 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 PPP2R3CQ969Q6 453 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 CCDC124Q96CT7 223 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 MTIF3Q9H2K0 278 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 CAPN9O14815 690 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 HNRNPDLO14979 420 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 WDR46O15213 610 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 HSPA2P54652 639 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SCRN1Q12765 414 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SFSWAPQ12872 951 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 TTLL4Q14679 1199 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 ANKRD20A3Q5VUR7 823 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SYT10Q6XYQ8 523 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 LRRC8AQ8IWT6 810 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SELENOSQ9BQE4 189 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 BARHL2Q9NY43 387 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 INTUQ9ULD6 942 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 ITIH6Q6UXX5 1313 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 LMNAP02545 664 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 ADCY2Q08462 1091 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 TFDP2Q14188 446 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 TOGARAM2Q6ZUX3 1019 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 FAM186BQ8IYM0 893 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 URGCPQ8TCY9 931 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 ANAPC5Q9UJX4 755 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 KRIT1O00522 736 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 TJP3O95049 919 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 KRT16P08779 473 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ARL4AP40617 200 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 PHKA1P46020 1223 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 LONRF2Q1L5Z9 754 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 TTC31Q49AM3 519 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 TBC1D9BQ66K14 1250 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 FBXO41Q8TF61 875 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 FAM212AQ96EL1 285 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 HACD3Q9P035 362 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 PPP2R2CQ9Y2T4 447 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 TARSL2A2RTX5 802 aaKnown RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 CEP104O60308 925 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 TOMM70O94826 608 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 IL18RAPO95256 599 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 KRT7P08729 469 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 CDK8P49336 464 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 GKAP1Q5VSY0 366 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 DPP9Q86TI2 863 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 VPS16Q9H269 839 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 NALCNQ8IZF0 1738 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ARHGEF18Q6ZSZ5 1173 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 PIGBQ92521 554 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 KRT35Q92764 455 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 SYN2Q92777 582 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF560Q96MR9 790 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 MTRQ99707 1265 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 NUF2Q9BZD4 464 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 RPF1Q9H9Y2 349 aaKnown RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 DNAJC8O75937 253 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 SETSIPP0DME0 302 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 C6orf118Q5T5N4 469 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 MFSD14CQ5VZR4 134 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF677Q86XU0 584 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 DAGLBQ8NCG7 672 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 NEDD1Q8NHV4 660 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 COA7Q96BR5 231 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 LZTFL1Q9NQ48 299 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 SLC38A7Q9NVC3 462 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms