RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 KIAA0825Q8IV33 1275 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 CHMP6Q96FZ7 201 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 NUP160Q12769 1436 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 STK10O94804 968 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 SASH1O94885 1247 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 CCDC124Q96CT7 223 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 KIF2CQ99661 725 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 NT5C3AQ9H0P0 336 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 TRPV6Q9H1D0 765 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 LRRIQ4A6NIV6 560 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 PDE8AO60658 829 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 LRRC1Q9BTT6 524 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 GUCY1A2P33402 732 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 UBE3AQ05086 875 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 EPHA10Q5JZY3 1008 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 CCNYQ8ND76 341 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 TCOF1Q13428 1488 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 ACTN1P12814 892 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 ZNF658Q5TYW1 1059 aaPredicted RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 CCDC84Q86UT8 332 aaPredicted RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 MSANTD4Q8NCY6 345 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 PTPRTO14522 1441 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 EVI5O60447 810 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 TFRCP02786 760 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 FCER1AP12319 257 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 Q3C1V9 767 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 MYLK4Q86YV6 388 aaPredicted RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 DEPDC1BQ8WUY9 529 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 SRLQ86TD4 932 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 FAM161BQ96MY7 647 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 GSTA4O15217 222 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 PSMC1P62191 440 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 ZNF394Q53GI3 561 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 HAUS3Q68CZ6 603 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 FAM186BQ8IYM0 893 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 CNPY4Q8N129 248 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 RPGRIP1Q96KN7 1286 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 LRGUKQ96M69 825 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 NOP53Q9NZM5 478 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 PRCPP42785 496 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 RINLQ6ZS11 566 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 TRIM50Q86XT4 487 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 TGS1Q96RS0 853 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 YY1AP1Q9H869 796 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 HPS4Q9NQG7 708 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 H3BQF6 201 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 SLC12A2P55011 1212 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 SPOPLQ6IQ16 392 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 FGD4Q96M96 766 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 EEF1DP29692 281 aaKnown RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 NUMBP49757 651 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 YARSP54577 528 aaKnown RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 CCZ1BP86790 482 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 CCZ1P86791 482 aaPredicted RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 PDE1BQ01064 536 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 FBXO41Q8TF61 875 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 SH2B2O14492 632 aaPredicted RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 NLRP7Q8WX94 980 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 ADAMTS1Q9UHI8 967 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 CA4P22748 312 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 TMTC4Q5T4D3 741 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 ALKBH8Q96BT7 664 aaKnown RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 SH3TC1Q8TE82 1336 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 TPTE2Q6XPS3 522 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 IL25Q9H293 177 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 AP5Z1O43299 807 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 PLCG2P16885 1265 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 FAM178BQ8IXR5 827 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 MAGI3Q5TCQ9 1506 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 CPP00450 1065 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 SLMAPQ14BN4 828 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 ELMO3Q96BJ8 720 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 RBM17Q96I25 401 aaKnown RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 A0A1W2PQ27 194 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 A0A1W2PQ64 194 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 A0A1W2PQD8 194 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 KLF6Q99612 283 aaPredicted RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 DDB1Q16531 1140 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 CAPRIN2Q6IMN6 1127 aaKnown RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 GGA1Q9UJY5 639 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 PNMA2Q9UL42 364 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 TCP11X1B4DZS4 312 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 DIAPH2O60879 1101 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 CDC27P30260 824 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 ALDH18A1P54886 795 aaKnown RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 CYTH1Q15438 398 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 ZNF473Q8WTR7 871 aaKnown RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 FMO2Q99518 471 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 ADGBQ8N7X0 1667 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 CFAP69A5D8W1 941 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 PNKPQ96T60 521 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 KIF9Q9HAQ2 790 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 TRPC6Q9Y210 931 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 SPDYE16A6NNV3 312 aaPredicted RBP8.12□□□□□ -1.11
RIF1-201ENST00000243326 SPDYE2Q495Y8 402 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 RFWD2Q8NHY2 731 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 ZSWIM5Q9P217 1185 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 ADGRG1Q9Y653 693 aa8.12□□□□□ -1.11
RIF1-201ENST00000243326 E4F1Q66K89 784 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms