RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MB21D2Q8IYB1 491 aaPredicted RBP14.18□□□□□ -0.14
MSH2-201ENST00000233146 ZNF653Q96CK0 615 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 SELENOSQ9BQE4 189 aa14.18□□□□□ -0.14
MSH2-201ENST00000233146 TRIM21P19474 475 aaKnown RBP14.17□□□□□ -0.14
MSH2-201ENST00000233146 RASA1P20936 1047 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 DNM2P50570 870 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 CFAP61Q8NHU2 1237 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 WDR66Q8TBY9 1149 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 MTMR8Q96EF0 704 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 ETNK1Q9HBU6 452 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 DBF4Q9UBU7 674 aaPredicted RBP14.17□□□□□ -0.14
MSH2-201ENST00000233146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.17□□□□□ -0.14
MSH2-201ENST00000233146 SKIP12755 728 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 CCNFP41002 786 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 OXCT1P55809 520 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 ANTXR2P58335 489 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 PRPF4BQ13523 1007 aaKnown RBP14.17□□□□□ -0.14
MSH2-201ENST00000233146 P3H1Q32P28 736 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 ZC2HC1CQ53FD0 456 aaPredicted RBP14.17□□□□□ -0.14
MSH2-201ENST00000233146 SLC15A3Q8IY34 581 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 LPIN2Q92539 896 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 ETNK2Q9NVF9 386 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 INTUQ9ULD6 942 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 CHMP2BQ9UQN3 213 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 MLH3Q9UHC1 1453 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 ALOX15P16050 662 aaPredicted RBP14.17□□□□□ -0.14
MSH2-201ENST00000233146 OCRLQ01968 901 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 TRIM29Q14134 588 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 KLHL7Q8IXQ5 586 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 USP38Q8NB14 1042 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 FAM13CQ8NE31 585 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 PPP2R3CQ969Q6 453 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 RMDN2Q96LZ7 410 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■■□ 26.4
MSH2-201ENST00000233146 ARL2BPQ9Y2Y0 163 aa14.17□□□□□ -0.14
MSH2-201ENST00000233146 ITGA2BP08514 1039 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 HNRNPH3P31942 346 aaKnown RBP14.16□□□□□ -0.14
MSH2-201ENST00000233146 VHLP40337 213 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 RNASELQ05823 741 aaKnown RBP14.16□□□□□ -0.14
MSH2-201ENST00000233146 DHX9Q08211 1270 aaKnown RBP14.16□□□□□ -0.14
MSH2-201ENST00000233146 WASHC2DQ5SRD0 308 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 ZNF554Q86TJ5 538 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 LRRC43Q8N309 656 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 LENG1Q96BZ8 264 aaPredicted RBP14.16□□□□□ -0.14
MSH2-201ENST00000233146 PGM2Q96G03 612 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 NOX5Q96PH1 765 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 CCDC28BQ9BUN5 200 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 MIS12Q9H081 205 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 DPH5Q9H2P9 285 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 PRKAG3Q9UGI9 489 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 TMEM94Q12767 1356 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 EEF1GP26641 437 aaKnown RBP14.16□□□□□ -0.14
MSH2-201ENST00000233146 KIF11P52732 1056 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 CCDC152Q4G0S7 254 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 TBC1D9BQ66K14 1250 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 DUS1LQ6P1R4 473 aaKnown RBP14.16□□□□□ -0.14
MSH2-201ENST00000233146 HOOK3Q86VS8 718 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 WDR60Q8WVS4 1066 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 SUCLG2Q96I99 432 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 LRMDAQ9H2I8 198 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 ARHGAP20Q9P2F6 1191 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 PCDHB6Q9Y5E3 794 aa14.16□□□□□ -0.14
MSH2-201ENST00000233146 STK36Q9NRP7 1315 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 A0A0J9YVX5 310 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 SUPT3HO75486 399 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 AFPP02771 609 aaKnown RBP14.15□□□□□ -0.14
MSH2-201ENST00000233146 CEBPAP49715 358 aaPredicted RBP14.15□□□□□ -0.14
MSH2-201ENST00000233146 RILPL1Q5EBL4 403 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 PHKBQ93100 1093 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 CLMNQ96JQ2 1002 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 hCG_2014768A0A024R1R8 64 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 A0A1W2PQJ5 194 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 ZPR1O75312 459 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 KLK7P49862 253 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 SPDYCQ5MJ68 293 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 DAB2IPQ5VWQ8 1189 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 AGGF1Q8N302 714 aaeCLIP14.15□□□□□ -0.14
MSH2-201ENST00000233146 DHTKD1Q96HY7 919 aaPredicted RBP14.15□□□□□ -0.14
MSH2-201ENST00000233146 EPSTI1Q96J88 318 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 PUS3Q9BZE2 481 aaKnown RBP14.15□□□□□ -0.14
MSH2-201ENST00000233146 TRPV5Q9NQA5 729 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 CHPF2Q9P2E5 772 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 BTBD18B2RXH4 712 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 ECE2O60344 883 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 HNRNPCP07910 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
MSH2-201ENST00000233146 VCAM1P19320 739 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 ANKLE1Q8NAG6 615 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 DCLRE1BQ9H816 532 aa14.15□□□□□ -0.14
MSH2-201ENST00000233146 CPDO75976 1380 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 BCRP11274 1271 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 VARSP26640 1264 aaKnown RBP14.14□□□□□ -0.15
MSH2-201ENST00000233146 LIN52Q52LA3 116 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 TMEM110Q86TL2 294 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 TMEM237Q96Q45 408 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 INIPQ9NRY2 104 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 NLRP2Q9NX02 1062 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 STOML1Q9UBI4 398 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 PLAGL2Q9UPG8 496 aa14.14□□□□□ -0.15
MSH2-201ENST00000233146 TBC1D30Q9Y2I9 924 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms