RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 RSRC2Q7L4I2 434 aaKnown RBP21.2■□□□□ 0.99
YBX3-201ENST00000228251 SLC35F6Q8N357 371 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 BAP1Q92560 729 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 EIF3CQ99613 913 aaKnown RBP21.2■□□□□ 0.99
YBX3-201ENST00000228251 GINM1Q9NU53 330 aa21.2■□□□□ 0.99
YBX3-201ENST00000228251 RLFQ13129 1914 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 CEP55Q53EZ4 464 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 ARHGAP27Q6ZUM4 889 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 JDP2Q8WYK2 163 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 RUSC1Q9BVN2 902 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 ZNF341Q9BYN7 854 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 EDEM3Q9BZQ6 932 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 KIAA1683Q9H0B3 1180 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 RGL1Q9NZL6 768 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 TRAF3IP3Q9Y228 551 aa21.2■□□□□ 0.98
YBX3-201ENST00000228251 LTBP3Q9NS15 1303 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 TRAF5O00463 557 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 WDR46O15213 610 aaKnown RBP21.19■□□□□ 0.98
YBX3-201ENST00000228251 SLITRK3O94933 977 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 KIF20AO95235 890 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 ZBTB7AO95365 584 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 GNA14O95837 355 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 MUTP22033 750 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 PPP2R3AQ06190 1150 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 RAD51AP2Q09MP3 1159 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 TSR1Q2NL82 804 aaKnown RBP21.19■□□□□ 0.98
YBX3-201ENST00000228251 CLEC4DQ8WXI8 215 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 LPAR1Q92633 364 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 HAUS4Q9H6D7 363 aa21.19■□□□□ 0.98
YBX3-201ENST00000228251 NHEJ1Q9H9Q4 299 aaPredicted RBP21.19■□□□□ 0.98
YBX3-201ENST00000228251 CYP4A11Q02928 519 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 TUBB2AQ13885 445 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 LRCH2Q5VUJ6 765 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 SLC30A10Q6XR72 485 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 SFR1Q86XK3 245 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 NELFCDQ8IXH7 590 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 MNS1Q8NEH6 495 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 TUBB2BQ9BVA1 445 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 BHMT2Q9H2M3 363 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 EHMT1Q9H9B1 1298 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 CDC23Q9UJX2 597 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 PHIPQ8WWQ0 1821 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 KRT18P05783 430 aaKnown RBP21.18■□□□□ 0.98
YBX3-201ENST00000228251 AMPD2Q01433 879 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 CCDC125Q86Z20 511 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 AGBL1Q96MI9 1066 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 COL20A1Q9P218 1284 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 TRIM10Q9UDY6 481 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 SCAF8Q9UPN6 1271 aaKnown RBP21.18■□□□□ 0.98
YBX3-201ENST00000228251 RABGAP1Q9Y3P9 1069 aa21.18■□□□□ 0.98
YBX3-201ENST00000228251 ZNF263O14978 683 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 LCA5LO95447 670 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 CYLC1P35663 651 aaPredicted RBP21.17■□□□□ 0.98
YBX3-201ENST00000228251 PRELPP51888 382 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 SETQ01105 290 aaPredicted RBP21.17■□□□□ 0.98
YBX3-201ENST00000228251 TNFAIP1Q13829 316 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 RINT1Q6NUQ1 792 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 UBXN4Q92575 508 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 FEZ1Q99689 392 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 OLFML3Q9NRN5 406 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 ZNHIT6Q9NWK9 470 aaKnown RBP21.17■□□□□ 0.98
YBX3-201ENST00000228251 ARHGAP20Q9P2F6 1191 aa21.17■□□□□ 0.98
YBX3-201ENST00000228251 FRMPD4Q14CM0 1322 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 MYH11P35749 1972 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 RCCD1A6NED2 376 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 RSPH10B2B2RC85 870 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 NOL4O94818 638 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 RSPH10BP0C881 870 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 ARP10275 920 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 POLD1P28340 1107 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 UBXN2AP68543 259 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 KRT83P78385 493 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 C1orf186Q6ZWK4 172 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 PRPF38AQ8NAV1 312 aaKnown RBP21.16■□□□□ 0.98
YBX3-201ENST00000228251 DYDC2Q96IM9 177 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 PCMTD1Q96MG8 357 aaPredicted RBP21.16■□□□□ 0.98
YBX3-201ENST00000228251 PURBQ96QR8 312 aaKnown RBP21.16■□□□□ 0.98
YBX3-201ENST00000228251 MTFR1LQ9H019 292 aa21.16■□□□□ 0.98
YBX3-201ENST00000228251 FAM207AQ9NSI2 230 aaPredicted RBP21.16■□□□□ 0.98
YBX3-201ENST00000228251 DDX41Q9UJV9 622 aaKnown RBP21.16■□□□□ 0.98
YBX3-201ENST00000228251 CTAGE9A4FU28 777 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 CTNND1O60716 968 aaKnown RBP21.15■□□□□ 0.98
YBX3-201ENST00000228251 BCRP11274 1271 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 KNOP1Q1ED39 458 aaKnown RBP21.15■□□□□ 0.98
YBX3-201ENST00000228251 CCDC155Q8N6L0 562 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 NAPGQ99747 312 aaPredicted RBP21.15■□□□□ 0.98
YBX3-201ENST00000228251 MXRA8Q9BRK3 442 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 WDR11Q9BZH6 1224 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 BCAS3Q9H6U6 928 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 ZNF446Q9NWS9 450 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 FAM53CQ9NYF3 392 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 CCPG1Q9ULG6 757 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 ASTN2O75129 1339 aaPredicted RBP21.15■□□□□ 0.98
YBX3-201ENST00000228251 PDXKO00764 312 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 CTTNQ14247 550 aaKnown RBP21.15■□□□□ 0.98
YBX3-201ENST00000228251 CCDC40Q4G0X9 1142 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 PDXDC1Q6P996 788 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 NIPA1Q7RTP0 329 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 UNC45AQ9H3U1 944 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 MMRN2Q9H8L6 949 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms