RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 VIMP08670 466 aaKnown RBP21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 SLCO1A2P46721 670 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 PTK2Q05397 1052 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 DCAF17Q5H9S7 520 aaPredicted RBP21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 KRT79Q5XKE5 535 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 C6orf89Q6UWU4 347 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 COA7Q96BR5 231 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 PIGSQ96S52 555 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 ACTR5Q9H9F9 607 aaPredicted RBP21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 PPP1R2P41236 205 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 FKBP3Q00688 224 aaKnown RBP21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 TMEM266Q2M3C6 531 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 SMIM5Q71RC9 77 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 CD302Q8IX05 232 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 GUF1Q8N442 669 aaKnown RBP21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 MREGQ8N565 214 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 ACSBG1Q96GR2 724 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 CARD10Q9BWT7 1032 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 CD2APQ9Y5K6 639 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 CAMTA1Q9Y6Y1 1673 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 RAD21O60216 631 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 BUB1BO60566 1050 aaPredicted RBP21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 GNAQP50148 359 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 ACCSLQ4AC99 568 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 HERC4Q5GLZ8 1057 aaPredicted RBP21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 C3orf67Q6ZVT6 689 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 KRT25Q7Z3Z0 450 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 METTL13Q8N6R0 699 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 IQCDQ96DY2 449 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 LAD1O00515 517 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 TMEM47Q9BQJ4 181 aa21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 SEPT11Q9NVA2 429 aaKnown RBP21.97■■□□□ 1.11
PPP1R3F-201ENST00000055335 EIF6P56537 245 aaKnown RBP21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 REXO1Q8N1G1 1221 aaKnown RBP21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 TGFBRAP1Q8WUH2 860 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 SH3GLB2Q9NR46 395 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 SLC12A6Q9UHW9 1150 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 L3MBTL1Q9Y468 752 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 PGRMC1O00264 195 aaKnown RBP21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 SLC37A4O43826 429 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 MYO1EQ12965 1108 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 MAPKAPK5Q8IW41 473 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 MIEF2Q96C03 454 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 PNMA5Q96PV4 448 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 MAGEF1Q9HAY2 307 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 FRMPD2Q68DX3 1309 aaPredicted RBP21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 SLC9A1P19634 815 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 PRPHP41219 470 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 LRRC63Q05C16 580 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 DIXDC1Q155Q3 683 aa21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 ARPP21Q9UBL0 812 aaPredicted RBP21.96■■□□□ 1.11
PPP1R3F-201ENST00000055335 M0R2N6 131 aa21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 ABCB4P21439 1286 aa21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 FAM26FQ5R3K3 315 aa21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 ELAC2Q9BQ52 826 aaKnown RBP21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 TACO1Q9BSH4 297 aaKnown RBP21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 PANK4Q9NVE7 773 aa21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 ADAMTS2O95450 1211 aa21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 GNA11P29992 359 aa21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 MKRN4PQ13434 485 aaPredicted RBP21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 MGARPQ8TDB4 240 aa21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 CELF1Q92879 486 aaKnown RBP21.95■■□□□ 1.1
PPP1R3F-201ENST00000055335 CAND2O75155 1236 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 PCP11498 1178 aaKnown RBP21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 ADAM9Q13443 819 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 GRM4Q14833 912 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 LLGL1Q15334 1064 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 ALKBH5Q6P6C2 394 aaKnown RBP21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 ATXN2Q99700 1313 aaKnown RBP21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 ECHS1P30084 290 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 IL6STP40189 918 aaPredicted RBP21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 NBPF9Q3BBW0 867 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 MARCH10Q8NA82 808 aaPredicted RBP21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 PSMD1Q99460 953 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 UTP11Q9Y3A2 253 aaKnown RBP21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 PCDHGC5Q9Y5F6 944 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 ERVV-1B6SEH8 477 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 COASYQ13057 564 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 CUL1Q13616 776 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 BMP2KQ9NSY1 1161 aaPredicted RBP21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 ATP8A2Q9NTI2 1148 aa21.94■■□□□ 1.1
PPP1R3F-201ENST00000055335 FGGP02679 453 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 PLTPP55058 493 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 A1CFQ9NQ94 594 aaKnown RBP21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 H0YGN5 161 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 ZNF211Q13398 564 aaPredicted RBP21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 ZNF571Q7Z3V5 609 aaPredicted RBP21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 CCDC197Q8NCU1 140 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 U2AF1L4Q8WU68 220 aaKnown RBP21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 STAMBPL1Q96FJ0 436 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 MINPP1Q9UNW1 487 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 NFS1Q9Y697 457 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 E9PMD0 336 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 MMEP08473 750 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 FGRP09769 529 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 PEX19P40855 299 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 BIRC3Q13489 604 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 CCDC38Q502W7 563 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 DGKHQ86XP1 1220 aa21.93■■□□□ 1.1
PPP1R3F-201ENST00000055335 SPDYE3A6NKU9 549 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms