RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ASIC2Q16515 512 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 CDC37Q16543 378 aaPredicted RBP11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 SLC18A3Q16572 532 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 PTGISQ16647 500 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 SWT1Q5T5J6 900 aaKnown RBP11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 MEI1Q5TIA1 1274 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 MICALCLQ6ZW33 695 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 NBPF5PQ86XG9 351 aaPredicted RBP11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 CEP95Q96GE4 821 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 CCT8L2Q96SF2 557 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 EDEM3Q9BZQ6 932 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 USP21Q9UK80 565 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 GRID2IPA4D2P6 1211 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 MDH1P40925 334 aaKnown RBP11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 RPS6KA1Q15418 735 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 UBE2SQ16763 222 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 CLEC4GQ6UXB4 293 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 NLRP14Q86W24 1093 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 WHAMMQ8TF30 809 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 INPP4AQ96PE3 977 aaPredicted RBP11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 AP1M1Q9BXS5 423 aa11.54□□□□□ -0.56
CX3CL1-201ENST00000006053 NPHP3-ACAD11A0A0J9YXS1 232 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 TMCO5BA8MYB1 307 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 FXR2P51116 673 aaKnown RBP eCLIP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 ADCY7P51828 1080 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 ODF2Q5BJF6 829 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 USP38Q8NB14 1042 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 GIMAP7Q8NHV1 300 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 BMP2KQ9NSY1 1161 aaPredicted RBP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 MYH1P12882 1939 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 RBAK-RBAKDNI3L0D1 243 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 MPHOSPH10O00566 681 aaKnown RBP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 NEBLO76041 1014 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 ACTN1P12814 892 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 MYCBPAPQ8TBZ2 947 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 CEP89Q96ST8 783 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 MYH14Q7Z406 1995 aaKnown RBP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 FAM170AA1A519 330 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 E9PMD0 336 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 PSMD2Q13200 908 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 HERC4Q5GLZ8 1057 aaPredicted RBP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 PROM2Q8N271 834 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 LRRC27Q9C0I9 530 aa11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 TAF1DQ9H5J8 278 aaPredicted RBP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 SRP68Q9UHB9 627 aaKnown RBP11.53□□□□□ -0.56
CX3CL1-201ENST00000006053 HMGB1P1B2RPK0 211 aaPredicted RBP11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 GCOM1H8Y6P7 765 aaPredicted RBP11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 BACH1O14867 736 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 KRT18P05783 430 aaKnown RBP11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 MYZAPP0CAP1 466 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 HSPA1LP34931 641 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 TEX11Q8IYF3 940 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 LRRC47Q8N1G4 583 aaKnown RBP11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 MREGQ8N565 214 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 MARCH10Q8NA82 808 aaPredicted RBP11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 WDR66Q8TBY9 1149 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 UBLCP1Q8WVY7 318 aaPredicted RBP11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 DNAJC19Q96DA6 116 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 CABS1Q96KC9 395 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 SPAG5Q96R06 1193 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 SETDB2Q96T68 719 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 PCDHGC5Q9Y5F6 944 aa11.52□□□□□ -0.56
CX3CL1-201ENST00000006053 SRCAPQ6ZRS2 3230 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 KCNA4P22459 653 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 CTNNA1P35221 906 aaKnown RBP11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 BTDP43251 543 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 SF3B2Q13435 895 aaKnown RBP11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 ADAM9Q13443 819 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 PRPF38AQ8NAV1 312 aaKnown RBP11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 DDX47Q9H0S4 455 aaKnown RBP11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 KIAA1551Q9HCM1 1747 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 LAMB1P07942 1786 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 HSD17B3P37058 310 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 SSR1P43307 286 aaKnown RBP11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 GSTO1P78417 241 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 ITGB3BPQ13352 177 aaPredicted RBP11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 SPATS2Q86XZ4 545 aaKnown RBP11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 CD302Q8IX05 232 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 NEDD1Q8NHV4 660 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 DDX25Q9UHL0 483 aaKnown RBP11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 KIAA1024Q9UPX6 916 aa11.52□□□□□ -0.57
CX3CL1-201ENST00000006053 SCN7AQ01118 1682 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 EDIL3O43854 480 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 TMOD1P28289 359 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 FNTAP49354 379 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 PDIA5Q14554 519 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 ZCWPW2Q504Y3 356 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 CLEC10AQ8IUN9 316 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 SYN2Q92777 582 aaPredicted RBP11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 TMBIM4Q9HC24 238 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 ABCA3Q99758 1704 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms