RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 RASSF7Q02833 373 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 PBXIP1Q96AQ6 731 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 KIF17Q9P2E2 1029 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 STRIP2Q9ULQ0 834 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 UHRF1BP1Q6BDS2 1440 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 KRT14P02533 472 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 SYMPKQ92797 1274 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 ATP6V0A1Q93050 837 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 GLT8D2Q9H1C3 349 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 ATP10BO94823 1461 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 CLCN1P35523 988 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 ERFEQ4G0M1 354 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 ZNF577Q9BSK1 485 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 TRIM55Q9BYV6 548 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 GDAQ9Y2T3 454 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 ENC1O14682 589 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 RNF40O75150 1001 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 IRF1P10914 325 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 MYL7Q01449 175 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 OR6B2Q6IFH4 312 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 OGFRQ9NZT2 677 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 DDIT3P35638 169 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 YWHAEP62258 255 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 PABPC4Q13310 644 aaKnown RBP eCLIP18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 THEMIS2Q5TEJ8 643 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 GEMIN8Q9NWZ8 242 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 KLHL14Q9P2G3 628 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 TNKSO95271 1327 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 IMPG1Q17R60 797 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 TBL3Q12788 808 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 WHAMMP3Q1A5X7 153 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 ERO1AQ96HE7 468 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 CDV3Q9UKY7 258 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 DOLKQ9UPQ8 538 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 POLR3AO14802 1390 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 OSBPP22059 807 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 PHKA1P46020 1223 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 ATXN7L3BQ96GX2 97 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 ATP8A2Q9NTI2 1148 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 ASAP1Q9ULH1 1129 aa18.37■□□□□ 0.53
CACNA1A-253ENST00000637927 ATL3Q6DD88 541 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 TRIM4Q9C037 500 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 SLC12A6Q9UHW9 1150 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 ARHGAP18Q8N392 663 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 CASS4Q9NQ75 786 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 CRKLP46109 303 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 PAK2Q13177 524 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 EDEM3Q9BZQ6 932 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 RPN1P04843 607 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 ADAM9Q13443 819 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 TNFAIP1Q13829 316 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 PASD1Q8IV76 773 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 ELMOD1Q8N336 334 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 TBC1D22AQ8WUA7 517 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 SEC31BQ9NQW1 1179 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 PRAMEF22A3QJZ6 481 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 P3H4Q92791 437 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 NT5C3AQ9H0P0 336 aa18.36■□□□□ 0.53
CACNA1A-253ENST00000637927 ARHGEF18Q6ZSZ5 1173 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 TMTC1Q8IUR5 882 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 POLD4Q9HCU8 107 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 HNRNPDLO14979 420 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 CACNA2D2Q9NY47 1150 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 TLR7Q9NYK1 1049 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 COL17A1Q9UMD9 1497 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 ASMTLO95671 621 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 PWP1Q13610 501 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 SFI1A8K8P3 1242 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 PDZD4Q76G19 769 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 SLFN12Q8IYM2 578 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 GRAMD1CQ8IYS0 662 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 COA7Q96BR5 231 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 USP28Q96RU2 1077 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 TPCN1Q9ULQ1 816 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 OR52Z1P0C646 297 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 CTTNBP2Q8WZ74 1663 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 E2F6O75461 281 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 DRP2Q13474 957 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 UBE2SQ16763 222 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 NEK8Q86SG6 692 aa18.35■□□□□ 0.53
CACNA1A-253ENST00000637927 NDUFA8P51970 172 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 KCTD2Q14681 263 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 TJAP1Q5JTD0 557 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 FAM160B1Q5W0V3 765 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 TTC1Q99614 292 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 ZMYM6O95789 1325 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 WDR64B1ANS9 1081 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 LRRC4Q9HBW1 653 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 KRT1P04264 644 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 PTGDRQ13258 359 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 PCDHA1Q9Y5I3 950 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 SRGAP2BP0DMP2 458 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 VCAM1P19320 739 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 TCP11X2Q5H9J9 407 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 DCAF15Q66K64 600 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 ADCK2Q7Z695 626 aa18.34■□□□□ 0.53
CACNA1A-253ENST00000637927 ZNF804BA4D1E1 1349 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms