RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 ARSHQ5FYA8 562 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 KIAA1755Q5JYT7 1200 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 TEX35Q5T0J7 233 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
CTSD-212ENST00000637815 FGFBP2Q9BYJ0 223 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 GOPCQ9HD26 462 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 ZBTB21Q9ULJ3 1066 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 COL4A3BPQ9Y5P4 624 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 ZRANB2O95218 330 aaKnown RBP eCLIP20.51■□□□□ 0.87
CTSD-212ENST00000637815 TAL1P17542 331 aaPredicted RBP20.51■□□□□ 0.87
CTSD-212ENST00000637815 CHMP4BP1P59074 171 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 AMPD2Q01433 879 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 FKBP1CQ5VVH2 108 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 ZC3H3Q8IXZ2 948 aaKnown RBP20.51■□□□□ 0.87
CTSD-212ENST00000637815 ACER1Q8TDN7 264 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 TRIM10Q9UDY6 481 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 VAV3Q9UKW4 847 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 GUCA1BQ9UMX6 200 aa20.51■□□□□ 0.87
CTSD-212ENST00000637815 NPHP3-ACAD11A0A0J9YXS1 232 aa20.5■□□□□ 0.87
CTSD-212ENST00000637815 MSH4O15457 936 aa20.5■□□□□ 0.87
CTSD-212ENST00000637815 RAD17O75943 681 aa20.5■□□□□ 0.87
CTSD-212ENST00000637815 KIF20AO95235 890 aa20.5■□□□□ 0.87
CTSD-212ENST00000637815 HOXA13P31271 388 aaPredicted RBP20.5■□□□□ 0.87
CTSD-212ENST00000637815 MARSP56192 900 aaKnown RBP20.5■□□□□ 0.87
CTSD-212ENST00000637815 HERC4Q5GLZ8 1057 aaPredicted RBP20.5■□□□□ 0.87
CTSD-212ENST00000637815 NCAPH2Q6IBW4 605 aa20.5■□□□□ 0.87
CTSD-212ENST00000637815 KCTD10Q9H3F6 313 aa20.5■□□□□ 0.87
CTSD-212ENST00000637815 EPHB6O15197 1021 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 TUBB4BP68371 445 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 WHAMMP3Q1A5X7 153 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 KRT222Q8N1A0 295 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 LARGE2Q8N3Y3 721 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 OGFOD1Q8N543 542 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 SYT2Q8N9I0 419 aaPredicted RBP20.49■□□□□ 0.87
CTSD-212ENST00000637815 SCFD1Q8WVM8 642 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 EDEM3Q9BZQ6 932 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 TRAF5O00463 557 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 TBC1D12O60347 775 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 IPO7O95373 1038 aaKnown RBP20.49■□□□□ 0.87
CTSD-212ENST00000637815 GNA14O95837 355 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 ZSCAN20P17040 1043 aaPredicted RBP20.49■□□□□ 0.87
CTSD-212ENST00000637815 BMS1Q14692 1282 aaKnown RBP20.49■□□□□ 0.87
CTSD-212ENST00000637815 CCDC122Q5T0U0 273 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 TMCO3Q6UWJ1 677 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 ARHGAP27Q6ZUM4 889 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 EHBP1Q8NDI1 1231 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 FAM207AQ9NSI2 230 aaPredicted RBP20.49■□□□□ 0.87
CTSD-212ENST00000637815 TBC1D7Q9P0N9 293 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 DNM3Q9UQ16 869 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 FHOD1Q9Y613 1164 aa20.49■□□□□ 0.87
CTSD-212ENST00000637815 IGLV3-22A0A075B6J6 115 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 KRT86O43790 486 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 FAM83BQ5T0W9 1011 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 PPP4R3CPQ6ZMV5 832 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 KIAA1328Q86T90 577 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 KCTD17Q8N5Z5 321 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 MTMR14Q8NCE2 650 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 JAKMIP2Q96AA8 810 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 VPS33BQ9H267 617 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 RANBP17Q9H2T7 1088 aaKnown RBP20.48■□□□□ 0.87
CTSD-212ENST00000637815 EMILIN3Q9NT22 766 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 PLA2G6O60733 806 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 PSMC6P62333 389 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 CACNB1Q02641 598 aaPredicted RBP20.48■□□□□ 0.87
CTSD-212ENST00000637815 GIT2Q14161 759 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 PURBQ96QR8 312 aaKnown RBP20.48■□□□□ 0.87
CTSD-212ENST00000637815 POLR3CQ9BUI4 534 aaPredicted RBP20.48■□□□□ 0.87
CTSD-212ENST00000637815 EPC1Q9H2F5 836 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 MMRN2Q9H8L6 949 aa20.48■□□□□ 0.87
CTSD-212ENST00000637815 ZNF277Q9NRM2 450 aaPredicted RBP20.48■□□□□ 0.87
CTSD-212ENST00000637815 LOXHD1Q8IVV2 1947 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 KRT18P05783 430 aaKnown RBP20.47■□□□□ 0.87
CTSD-212ENST00000637815 KCNA3P22001 575 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 EDRF1Q3B7T1 1238 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 CYP2W1Q8TAV3 490 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 CHURC1Q8WUH1 139 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 BAP1Q92560 729 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 PARD6BQ9BYG5 372 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 ARHGAP20Q9P2F6 1191 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 MYO6Q9UM54 1294 aa20.47■□□□□ 0.87
CTSD-212ENST00000637815 RCCD1A6NED2 376 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 LCA5LO95447 670 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 CCDC40Q4G0X9 1142 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 TRAPPC11Q7Z392 1133 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 FAM83AQ86UY5 434 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 TRIM59Q8IWR1 403 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 CCDC42Q96M95 316 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 PDGFDQ9GZP0 370 aaPredicted RBP20.46■□□□□ 0.87
CTSD-212ENST00000637815 LACRTQ9GZZ8 138 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 VCPKMTQ9H867 229 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 PUF60Q9UHX1 559 aaKnown RBP20.46■□□□□ 0.87
CTSD-212ENST00000637815 ZBTB12Q9Y330 459 aaPredicted RBP20.46■□□□□ 0.87
CTSD-212ENST00000637815 MYH10P35580 1976 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 PNMA6AP0CW24 399 aaPredicted RBP20.46■□□□□ 0.87
CTSD-212ENST00000637815 ZNF76P36508 570 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 VAV2P52735 878 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 RAD51AP2Q09MP3 1159 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 KCNMA1Q12791 1236 aa20.46■□□□□ 0.87
CTSD-212ENST00000637815 PABPC4Q13310 644 aaKnown RBP eCLIP20.46■□□□□ 0.873e-14■■■■■ 35
CTSD-212ENST00000637815 NELFCDQ8IXH7 590 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms