RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 TEKT3Q9BXF9 490 aa17.69■□□□□ 0.42
CACNA1A-238ENST00000637276 RAB17Q9H0T7 212 aa17.69■□□□□ 0.42
CACNA1A-238ENST00000637276 Q9H521 79 aa17.69■□□□□ 0.42
CACNA1A-238ENST00000637276 GTF2A1LQ9UNN4 478 aa17.69■□□□□ 0.42
CACNA1A-238ENST00000637276 ZNF263O14978 683 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 RERGLQ9H628 205 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 TLK1Q9UKI8 766 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 RAD50Q92878 1312 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 VAMP4O75379 141 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 GCP02774 474 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 HNRNPCP07910 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 EHHADHQ08426 723 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 SIX6OS1Q8N1H7 587 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 ANKRD49Q8WVL7 239 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 SNX2O60749 519 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 NUDCD1Q96RS6 583 aa17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 DDX5P17844 614 aaKnown RBP17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 WARS2Q9UGM6 360 aaKnown RBP17.68■□□□□ 0.42
CACNA1A-238ENST00000637276 EPB42P16452 691 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 PPP3CCP48454 512 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 SEMA3FQ13275 785 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 TAS2R42Q7RTR8 314 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 CSRNP1Q96S65 589 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 TRPC5Q9UL62 973 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 SAR1BQ9Y6B6 198 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 TMEM247A6NEH6 219 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 KCTD2Q14681 263 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 OR6B3Q8NGW1 331 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 DCTPP1Q9H773 170 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 SLC7A5Q01650 507 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 HMBSP08397 361 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 FAM160B1Q5W0V3 765 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 ZNF577Q9BSK1 485 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 GINM1Q9NU53 330 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 NDE1Q9NXR1 346 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 ARPP21Q9UBL0 812 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 TRAF3IP3Q9Y228 551 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 TCP11Q8WWU5 503 aa17.67■□□□□ 0.42
CACNA1A-238ENST00000637276 EYA2O00167 538 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 STXBP2Q15833 593 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 TDRD7Q8NHU6 1098 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 BCAP29Q9UHQ4 241 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 FOSL2P15408 326 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 MAPK4P31152 587 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 GUCY2DQ02846 1103 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 FSCBQ5H9T9 825 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 EGFL8Q99944 293 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 ZFYVE1Q9HBF4 777 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 PPARGC1AQ9UBK2 798 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 PNMA6EA0A0J9YXQ4 647 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 PDE8AO60658 829 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 DENND3A2RUS2 1198 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 POLR2BP30876 1174 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 BAG6P46379 1132 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 VN1R5Q7Z5H4 357 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 E7EWF7 191 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 PPP6R3Q5H9R7 873 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 PHLDB3Q6NSJ2 640 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 KMT5AQ9NQR1 393 aa17.66■□□□□ 0.42
CACNA1A-238ENST00000637276 DCTN3O75935 186 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 IMPDH2P12268 514 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 C16orf87Q6PH81 154 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 PALMDQ9NP74 551 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 KIAA1024Q9UPX6 916 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 ASXL1Q8IXJ9 1541 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 E5RI56 91 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 PRR23CQ6ZRP0 262 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 SUPT3HO75486 399 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 RECQLP46063 649 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 ZSCAN26Q16670 478 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 TMTC1Q8IUR5 882 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 DMAP1Q9NPF5 467 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 LRRC53A6NM62 1247 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 ARHGAP45Q92619 1136 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 CCDC124Q96CT7 223 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 C14orf93Q9H972 538 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 IL16Q14005 1332 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 SPDYE5A6NIY4 337 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 HOXA13P31271 388 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 ARHGAP25P42331 645 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 MTMR3Q13615 1198 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 COBLL1Q53SF7 1204 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 ADALQ6DHV7 355 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 APPBP2Q92624 585 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 SH3TC1Q8TE82 1336 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 MAP2K2P36507 400 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 NSFP46459 744 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 TUBB4BP68371 445 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 SMC5Q8IY18 1101 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 ATP8A1Q9Y2Q0 1164 aa17.65■□□□□ 0.42
CACNA1A-238ENST00000637276 ODR4Q5SWX8 454 aa17.64■□□□□ 0.42
CACNA1A-238ENST00000637276 GRK7Q8WTQ7 553 aa17.64■□□□□ 0.42
CACNA1A-238ENST00000637276 CAPS2Q9BXY5 557 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms