RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GGT7Q9UJ14 662 aa3.51□□□□□ -1.85
VIM-210ENST00000637053 FBXO10Q9UK96 956 aa3.51□□□□□ -1.85
VIM-210ENST00000637053 SETD1BQ9UPS6 1966 aaKnown RBP3.51□□□□□ -1.85
VIM-210ENST00000637053 H0Y3Z8 333 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 TOR1BO14657 336 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 CPLX1O14810 134 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 TMCC2O75069 709 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 KATNA1O75449 491 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 LRIG2O94898 1065 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 INMTO95050 263 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 CBX7O95931 251 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 GNA15P30679 374 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 ABCD1P33897 745 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 CAP2P40123 477 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 RXRGP48443 463 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 GUCY2FP51841 1108 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 CCT2P78371 535 aaKnown RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 PFKPQ01813 784 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 CHAF1AQ13111 956 aaPredicted RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 TBX2Q13207 712 aaPredicted RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 GRM2Q14416 872 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 SMC1AQ14683 1233 aaKnown RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 TCEA2Q15560 299 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 PTPN14Q15678 1187 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 VMACQ2NL98 169 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 SPATS1Q496A3 300 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 ZC3H12BQ5HYM0 836 aaKnown RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 CDCA2Q69YH5 1023 aaPredicted RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 SWSAP1Q6NVH7 229 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 PLBD1Q6P4A8 553 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 CCDC129Q6ZRS4 1044 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 C1orf122Q6ZSJ8 110 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 TOGARAM2Q6ZUX3 1019 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 MCM10Q7L590 875 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 EEPD1Q7L9B9 569 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 RASGRP2Q7LDG7 609 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 ERC1Q8IUD2 1116 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 TMEM151BQ8IW70 566 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 GIMAP8Q8ND71 665 aaPredicted RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 GRIN3AQ8TCU5 1115 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 TMC1Q8TDI8 760 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 TIFAQ96CG3 184 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 HVCN1Q96D96 273 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 AGAP3Q96P47 875 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 ELAC2Q9BQ52 826 aaKnown RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 SARGQ9BW04 601 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 FBRSQ9HAH7 460 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 OBP2AQ9NY56 170 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 RABL2AQ9UBK7 228 aaPredicted RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 TPCN1Q9ULQ1 816 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 PLAAQ9Y263 795 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 RRP15Q9Y3B9 282 aaKnown RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 MSRB2Q9Y3D2 182 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 MAGED1Q9Y5V3 778 aaPredicted RBP3.5□□□□□ -1.85
VIM-210ENST00000637053 USP31Q70CQ4 1352 aa3.5□□□□□ -1.85
VIM-210ENST00000637053 RAD54L2Q9Y4B4 1467 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 SLC22A31A6NKX4 558 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 VSTM5A8MXK1 200 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 BOLA2-SMG1P6H3BVE0 249 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 J3KRW8 73 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 K7ENM7 598 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 OVOL3O00110 214 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 FANCGO15287 622 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 IGHA2P01877 340 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 PGRP06401 933 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 ATF7P17544 494 aaPredicted RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 NASPP49321 788 aaPredicted RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 UBASH3AP57075 661 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 KRT83P78385 493 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 HNRNPUQ00839 825 aaKnown RBP eCLIP3.49□□□□□ -1.85
VIM-210ENST00000637053 APBA1Q02410 837 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 PPP2R3AQ06190 1150 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 TNK2Q07912 1038 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 APOBRQ0VD83 1088 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 IFRD2Q12894 506 aaPredicted RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 STK3Q13188 491 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 SLBPQ14493 270 aaKnown RBP eCLIP3.49□□□□□ -1.85
VIM-210ENST00000637053 SLMAPQ14BN4 828 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 KRT72Q14CN4 511 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 ELF2Q15723 593 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 FXNQ16595 210 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 TM4SF20Q53R12 229 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 COBLL1Q53SF7 1204 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 CT47A1Q5JQC4 288 aaPredicted RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 AGAP9Q5VTM2 703 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 TMEM132EQ6IEE7 984 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 HIBCHQ6NVY1 386 aaPredicted RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 UNC5DQ6UXZ4 953 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 KCT2Q8NC54 265 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 FBF1Q8TES7 1133 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 IPCEF1Q8WWN9 437 aaPredicted RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 SYAP1Q96A49 352 aaPredicted RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 HOOK2Q96ED9 719 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 INTS4Q96HW7 963 aaKnown RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 DMRTB1Q96MA1 342 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 SMAD5Q99717 465 aaKnown RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 MIPEPQ99797 713 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 EIF2AK1Q9BQI3 630 aaKnown RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 CCDC113Q9H0I3 377 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 SLC6A17Q9H1V8 727 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms