RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 PCMTD1Q96MG8 357 aaPredicted RBP13.75□□□□□ -0.21
PTPN11-205ENST00000635625 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
PTPN11-205ENST00000635625 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
PTPN11-205ENST00000635625 GBP3Q9H0R5 595 aa13.75□□□□□ -0.21
PTPN11-205ENST00000635625 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
PTPN11-205ENST00000635625 ARFGAP3Q9NP61 516 aa13.75□□□□□ -0.21
PTPN11-205ENST00000635625 ERLIN1O75477 346 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 PNMA6AP0CW24 399 aaPredicted RBP13.74□□□□□ -0.21
PTPN11-205ENST00000635625 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
PTPN11-205ENST00000635625 SLC16A2P36021 539 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 PTGER2P43116 358 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 MARSP56192 900 aaKnown RBP13.74□□□□□ -0.21
PTPN11-205ENST00000635625 FKBP3Q00688 224 aaKnown RBP13.74□□□□□ -0.21
PTPN11-205ENST00000635625 ZCWPW2Q504Y3 356 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 SYDE2Q5VT97 1194 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 MAMSTRQ6ZN01 415 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 KIAA1328Q86T90 577 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 KIAA0825Q8IV33 1275 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 MSL3Q8N5Y2 521 aaKnown RBP13.74□□□□□ -0.21
PTPN11-205ENST00000635625 CRYGNQ8WXF5 182 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 DNAJC19Q96DA6 116 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 CHP1Q99653 195 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 PLAGL2Q9UPG8 496 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 SIK3Q9Y2K2 1263 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 REXO2Q9Y3B8 237 aaKnown RBP13.74□□□□□ -0.21
PTPN11-205ENST00000635625 FHOD1Q9Y613 1164 aa13.74□□□□□ -0.21
PTPN11-205ENST00000635625 FRMD3A2A2Y4 597 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 CTAGE15A4D2H0 777 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 DDTLA6NHG4 134 aaPredicted RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 PIK3CDO00329 1044 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 CTAGE8P0CG41 777 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 IDEP14735 1019 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 MCM3P25205 808 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 CIITAP33076 1130 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 SREBF1P36956 1147 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 RBM5P52756 815 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 AMPD2Q01433 879 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 CKAP4Q07065 602 aaKnown RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 SPA17Q15506 151 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 RBM26Q5T8P6 1007 aaKnown RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 CTAGE6Q86UF2 777 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 CTAGE4Q8IX94 777 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 SYN2Q92777 582 aaPredicted RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 JAKMIP2Q96AA8 810 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 NHEJ1Q9H9Q4 299 aaPredicted RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 SCUBE2Q9NQ36 999 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 PANK4Q9NVE7 773 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 TMOD2Q9NZR1 351 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 FAM184BQ9ULE4 1060 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 MYO6Q9UM54 1294 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 KIF13BQ9NQT8 1826 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 LCA5LO95447 670 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 PLA2G4BP0C869 781 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 VAV2P52735 878 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 HERVK_113P62684 666 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 EDRF1Q3B7T1 1238 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 CCDC122Q5T0U0 273 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 CC2D1AQ6P1N0 951 aaPredicted RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 DYMQ7RTS9 669 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 ZC3H3Q8IXZ2 948 aaKnown RBP13.73□□□□□ -0.21
PTPN11-205ENST00000635625 RAB21Q9UL25 225 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
PTPN11-205ENST00000635625 LOXHD1Q8IVV2 1947 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 F5H6K3 240 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 MEIS2O14770 477 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 CYP3A4P08684 503 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 BMP3P12645 472 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 KLRC3Q07444 240 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 PAPD7Q5XG87 772 aaKnown RBP13.72□□□□□ -0.21
PTPN11-205ENST00000635625 SH3BP5LQ7L8J4 393 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 ZFPM1Q8IX07 1006 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 ETNPPLQ8TBG4 499 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 CCDC42Q96M95 316 aa13.72□□□□□ -0.21
PTPN11-205ENST00000635625 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
PTPN11-205ENST00000635625 RASSF10A6NK89 507 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 NDUFB10O96000 172 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 RPA1P27694 616 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 TCP10Q12799 353 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 KIF5AQ12840 1032 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 KCNK18Q7Z418 384 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 NEK11Q8NG66 645 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 NUDT12Q9BQG2 462 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 PARD6BQ9BYG5 372 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 MTFR1LQ9H019 292 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 EHMT1Q9H9B1 1298 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 LUC7LQ9NQ29 371 aaKnown RBP13.71□□□□□ -0.21
PTPN11-205ENST00000635625 AGPAT5Q9NUQ2 364 aa13.71□□□□□ -0.21
PTPN11-205ENST00000635625 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L15C9J2P7 530 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L13C9JLJ4 530 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L11C9JVI0 530 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L18D6R9N7 530 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms