RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 FKBP3Q00688 224 aaKnown RBP13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 TUBB2AQ13885 445 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 KIF4BQ2VIQ3 1234 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 HERC4Q5GLZ8 1057 aaPredicted RBP13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 CCDC84Q86UT8 332 aaPredicted RBP13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 TUBB2BQ9BVA1 445 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 VPS33BQ9H267 617 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 TBC1D7Q9P0N9 293 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 PCDHA2Q9Y5H9 948 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 PITPNM2Q9BZ72 1349 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 MSH4O15457 936 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 KCNA3P22001 575 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 KRT83P78385 493 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 POTEAQ6S8J7 498 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 CHURC1Q8WUH1 139 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 OGFRQ9NZT2 677 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 ZNRF3Q9ULT6 936 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 SIK3Q9Y2K2 1263 aa13.56□□□□□ -0.24
PHACTR4-206ENST00000632421 TBC1D12O60347 775 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 CACNB1Q02641 598 aaPredicted RBP13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 CCDC170Q8IYT3 715 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 AGBL3Q8NEM8 1001 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 NAPGQ99747 312 aaPredicted RBP13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 TMEM39BQ9GZU3 492 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 HAUS4Q9H6D7 363 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 CDC23Q9UJX2 597 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 SMCHD1A6NHR9 2005 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 GOLGB1Q14789 3259 aaKnown RBP13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 TRAF5O00463 557 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 SPATA31C1P0DKV0 1188 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 CDK17Q00537 523 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 RAD51AP2Q09MP3 1159 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 ARSHQ5FYA8 562 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 NHEJ1Q9H9Q4 299 aaPredicted RBP13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 ARGLU1Q9NWB6 273 aaPredicted RBP13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 COL4A3BPQ9Y5P4 624 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 IPO7O95373 1038 aaKnown RBP13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 HERVK_113P62684 666 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 CCDC174Q6PII3 467 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 CEP63Q96MT8 703 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 RANBP17Q9H2T7 1088 aaKnown RBP13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 VCPKMTQ9H867 229 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 VAV3Q9UKW4 847 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 GUCA1BQ9UMX6 200 aa13.55□□□□□ -0.24
PHACTR4-206ENST00000632421 CFBP00751 764 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 IRX5P78411 483 aaPredicted RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 TEX35Q5T0J7 233 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 RSRC2Q7L4I2 434 aaKnown RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 FAM83AQ86UY5 434 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 NELFCDQ8IXH7 590 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 GOLGA1Q92805 767 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 ZHX3Q9H4I2 956 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 MMRN2Q9H8L6 949 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 KIF13BQ9NQT8 1826 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 GCOM1H8Y6P7 765 aaPredicted RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 MEIS1O00470 390 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 POLR2MP0CAP2 368 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 PSMC6P62333 389 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 PABPC4Q13310 644 aaKnown RBP eCLIP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 CCDC40Q4G0X9 1142 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 MIGA2Q7L4E1 593 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 KIAA1328Q86T90 577 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 SYT2Q8N9I0 419 aaPredicted RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 EIF3CLB5ME19 914 aaKnown RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 GNA14O95837 355 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 CAP2P40123 477 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 CLCN6P51797 869 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 ZYXQ15942 572 aaKnown RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 ZNF662Q6ZS27 426 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 FAM160B2Q86V87 743 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 GPR161Q8N6U8 529 aaKnown RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 CEP112Q8N8E3 955 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 EIF3CQ99613 913 aaKnown RBP13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 EMILIN3Q9NT22 766 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 TRIM10Q9UDY6 481 aa13.54□□□□□ -0.24
PHACTR4-206ENST00000632421 PLA2G6O60733 806 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 HNRNPH3P31942 346 aaKnown RBP13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 CCDC122Q5T0U0 273 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 SRGAP1Q7Z6B7 1085 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 KCTD10Q9H3F6 313 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 MRPL11Q9Y3B7 192 aaKnown RBP13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 IGLV3-22A0A075B6J6 115 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 EPHB6O15197 1021 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 ERCC3P19447 782 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms