RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SLC38A10Q9HBR0 1119 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 SYNMO15061 1565 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 HEXIM1O94992 359 aaKnown RBP13.89□□□□□ -0.19
SCN8A-209ENST00000627620 LARGE1O95461 756 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 KRT1P04264 644 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 KRT3P12035 628 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 ABCD1P33897 745 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 SEPT2Q15019 361 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 TTC19Q6DKK2 380 aaPredicted RBP13.89□□□□□ -0.19
SCN8A-209ENST00000627620 RAPH1Q70E73 1250 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 ENOX1Q8TC92 643 aaKnown RBP13.89□□□□□ -0.19
SCN8A-209ENST00000627620 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 AIFM3Q96NN9 605 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 THAP9Q9H5L6 903 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 EPB41L5Q9HCM4 733 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 PGRMC1O00264 195 aaKnown RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 HIP1RO75146 1068 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 PSAPP07602 524 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 ACTN1P12814 892 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 RXRBP28702 533 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 HOXA13P31271 388 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 PSMD2Q13200 908 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 C7orf31Q8N865 590 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 GBP7Q8N8V2 638 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 OSTNP61366 133 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 DBN1Q16643 649 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 DNAJC24Q6P3W2 148 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 ARMC9Q7Z3E5 817 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 GPR101Q96P66 508 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 CFAP74Q9C0B2 1584 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 GPC4O75487 556 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 DDIT3P35638 169 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 IL9RQ01113 521 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 TSTA3Q13630 321 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 FAM160B2Q86V87 743 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 ACRBPQ8NEB7 543 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 CFAP61Q8NHU2 1237 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 TYW5A2RUC4 315 aaKnown RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 MED7O43513 233 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 ECEL1O95672 775 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 MXI1P50539 228 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 PLTPP55058 493 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 ZNF772Q68DY9 489 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 MRPL47Q9HD33 250 aaKnown RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 VCX3AQ9NNX9 186 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 INTS9Q9NV88 658 aaKnown RBP13.88□□□□□ -0.19
SCN8A-209ENST00000627620 ZMYND10O75800 440 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 MOCS3O95396 460 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 FTCDO95954 541 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 NPR1P16066 1061 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 IFNAR2P48551 515 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 DYNLT1P63172 113 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 ASPHQ12797 758 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 RESTQ13127 1097 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 LLGL1Q15334 1064 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 MMEL1Q495T6 779 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 MCUQ8NE86 351 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 LRFN2Q9ULH4 789 aa13.88□□□□□ -0.19
SCN8A-209ENST00000627620 MCF2LO15068 1137 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 ZSCAN20P17040 1043 aaPredicted RBP13.87□□□□□ -0.19
SCN8A-209ENST00000627620 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
SCN8A-209ENST00000627620 NHEJ1Q9H9Q4 299 aaPredicted RBP13.87□□□□□ -0.19
SCN8A-209ENST00000627620 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 PRR36Q9H6K5 1346 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 SOWAHDA6NJG2 315 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 S100BP04271 92 aaPredicted RBP13.87□□□□□ -0.19
SCN8A-209ENST00000627620 SNAP25P60880 206 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 RNASELQ05823 741 aaKnown RBP13.87□□□□□ -0.19
SCN8A-209ENST00000627620 FOXP4Q8IVH2 680 aaPredicted RBP13.87□□□□□ -0.19
SCN8A-209ENST00000627620 COA1Q9GZY4 146 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 EIF2AK2P19525 551 aaKnown RBP13.87□□□□□ -0.19
SCN8A-209ENST00000627620 CXCR5P32302 372 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 EPHB4P54760 987 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 CTTNQ14247 550 aaKnown RBP13.87□□□□□ -0.19
SCN8A-209ENST00000627620 SIRT2Q8IXJ6 389 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 H7C1W4 665 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 CPP00450 1065 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 CD58P19256 250 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 ARL4AP40617 200 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 ZBED6P86452 979 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 NECTIN1Q15223 517 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 PPP1R16BQ96T49 567 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 SPZ1Q9BXG8 430 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 USH1CQ9Y6N9 552 aa13.87□□□□□ -0.19
SCN8A-209ENST00000627620 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 PDXDC2PQ6P474 469 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 XPAP23025 273 aaPredicted RBP13.86□□□□□ -0.19
SCN8A-209ENST00000627620 RFC1P35251 1148 aaPredicted RBP13.86□□□□□ -0.19
SCN8A-209ENST00000627620 MCAMP43121 646 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 ADCY1Q08828 1119 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 C2orf54Q08AI8 447 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 OR6B2Q6IFH4 312 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 CYP4F22Q6NT55 531 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 ATP8A1Q9Y2Q0 1164 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 SERPING1P05155 500 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms