RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 CCM2LQ9NUG4 571 aaPredicted RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 MKS1Q9NXB0 559 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 MKL2Q9ULH7 1088 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 ANKRD6Q9Y2G4 727 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 FAM47E-STBD1D6RA91 191 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 H3BS24 57 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 SPATA31C1P0DKV0 1188 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 HDAC1Q13547 482 aaPredicted RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 DHX8Q14562 1220 aaKnown RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 GAB4Q2WGN9 574 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 OGFOD3Q6PK18 319 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 C22orf34Q6ZV56 151 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 FBXL6Q8N531 539 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 KIAA1958Q8N8K9 716 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 LINC00116Q8NCU8 138 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 ENOX1Q8TC92 643 aaKnown RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 PARD3BQ8TEW8 1205 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 ZNF496Q96IT1 587 aaPredicted RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 ERVK13-1Q9NX77 482 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 CLDND1Q9NY35 253 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 GULP1Q9UBP9 304 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 SERPINB13Q9UIV8 391 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 DAAM1Q9Y4D1 1078 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 PCDHA11Q9Y5I1 949 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 WASHC2AQ641Q2 1341 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 PPFIA4O75335 1185 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 TPP2P29144 1249 aaPredicted RBP4.92□□□□□ -1.62
LRRC39-204ENST00000620882 NOP2P46087 812 aaKnown RBP4.92□□□□□ -1.62
LRRC39-204ENST00000620882 USP14P54578 494 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 LACTBP83111 547 aaPredicted RBP4.92□□□□□ -1.62
LRRC39-204ENST00000620882 GBX1Q14549 363 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 CLUL1Q15846 466 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 IFI16Q16666 785 aaKnown RBP4.92□□□□□ -1.62
LRRC39-204ENST00000620882 UVSSAQ2YD98 709 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 MINDY4Q4G0A6 757 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 ARHGAP36Q6ZRI8 547 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 ZAR1Q86SH2 424 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 PJA1Q8NG27 643 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 PIWIL2Q8TC59 973 aaKnown RBP4.92□□□□□ -1.62
LRRC39-204ENST00000620882 JADE3Q92613 823 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 COX4I2Q96KJ9 171 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 HSPA12BQ96MM6 686 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 TAAR9Q96RI9 348 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 BOCQ9BWV1 1114 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 TOMM22Q9NS69 142 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 SAP30BPQ9UHR5 308 aaKnown RBP4.92□□□□□ -1.62
LRRC39-204ENST00000620882 PNMA8BQ9ULN7 279 aaPredicted RBP4.92□□□□□ -1.62
LRRC39-204ENST00000620882 SPO11Q9Y5K1 396 aa4.92□□□□□ -1.62
LRRC39-204ENST00000620882 WTIPA6NIX2 430 aaPredicted RBP4.91□□□□□ -1.62
LRRC39-204ENST00000620882 TRIM75PA6NK02 468 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 MAN2B1O00754 1011 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 IL33O95760 270 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 OSMP13725 252 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 PURAQ00577 322 aaKnown RBP4.91□□□□□ -1.62
LRRC39-204ENST00000620882 OCRLQ01968 901 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 CRY1Q16526 586 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 ARHGAP29Q52LW3 1261 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 COBLL1Q53SF7 1204 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 PAOXQ6QHF9 649 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 C11orf96Q7Z7L8 435 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 RUNDC1Q96C34 613 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 CD244Q9BZW8 370 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 ZSWIM5Q9P217 1185 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 EBF1Q9UH73 591 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 EDARQ9UNE0 448 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 PLAGL2Q9UPG8 496 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 DNM3Q9UQ16 869 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 GIT1Q9Y2X7 761 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 FRMPD2Q68DX3 1309 aaPredicted RBP4.91□□□□□ -1.62
LRRC39-204ENST00000620882 GOLGA8AA7E2F4 631 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 GOLGA8BA8MQT2 603 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 KDM1AO60341 852 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 LORP23490 312 aaPredicted RBP4.91□□□□□ -1.62
LRRC39-204ENST00000620882 KIF11P52732 1056 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 OXCT1P55809 520 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 LSAMPQ13449 338 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 ACAP2Q15057 778 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 CEP68Q76N32 757 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 SPICE1Q8N0Z3 855 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 RTF1Q92541 710 aaKnown RBP4.91□□□□□ -1.62
LRRC39-204ENST00000620882 MFSD14AQ96MC6 490 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 ZNF700Q9H0M5 742 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 SMOC1Q9H4F8 434 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 PRDM12Q9H4Q4 367 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 PRDM11Q9NQV5 511 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 MARCH2Q9P0N8 246 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 FNIP2Q9P278 1114 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 INVSQ9Y283 1065 aa4.91□□□□□ -1.62
LRRC39-204ENST00000620882 TIMM13Q9Y5L4 95 aaPredicted RBP4.91□□□□□ -1.62
LRRC39-204ENST00000620882 CCDC189A1A4V9 331 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 FAM155AB1AL88 458 aaPredicted RBP4.9□□□□□ -1.63
LRRC39-204ENST00000620882 H7C1D1 291 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 IGF2BP3O00425 579 aaKnown RBP eCLIP4.9□□□□□ -1.63
LRRC39-204ENST00000620882 IFRD1O00458 451 aaPredicted RBP4.9□□□□□ -1.63
LRRC39-204ENST00000620882 AP1G1O43747 822 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 MYL3P08590 195 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 CLEC2LP0C7M8 214 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 C5AR1P21730 350 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 CYP2C19P33261 490 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 PCBP3P57721 371 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms