RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 FAM47CQ5HY64 1035 aa18.31■□□□□ 0.52
BRCA1-228ENST00000618469 CELF3Q5SZQ8 465 aaKnown RBP18.31■□□□□ 0.52
BRCA1-228ENST00000618469 XRRA1Q6P2D8 792 aa18.31■□□□□ 0.52
BRCA1-228ENST00000618469 PPTC7Q8NI37 304 aa18.31■□□□□ 0.52
BRCA1-228ENST00000618469 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
BRCA1-228ENST00000618469 ZNF274Q96GC6 653 aaPredicted RBP18.31■□□□□ 0.52
BRCA1-228ENST00000618469 SEZ6LQ9BYH1 1024 aa18.31■□□□□ 0.52
BRCA1-228ENST00000618469 REV3LO60673 3130 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 B4GALT4O60513 344 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 CD4P01730 458 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 ZNF286BP0CG31 522 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 TGFB3P10600 412 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 ICAM3P32942 547 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 PLA2G5P39877 138 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 SP2Q02086 613 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 TFF2Q03403 129 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 DGKDQ16760 1214 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 MYSM1Q5VVJ2 828 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 NLRX1Q86UT6 975 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 TRIM22Q8IYM9 498 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 IL27Q8NEV9 243 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 CCDC12Q8WUD4 166 aaPredicted RBP18.3■□□□□ 0.52
BRCA1-228ENST00000618469 FAM122AQ96E09 287 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 SPATA33Q96N06 139 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 ANO3Q9BYT9 981 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 GLT8D2Q9H1C3 349 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 ALDH8A1Q9H2A2 487 aaPredicted RBP18.3■□□□□ 0.52
BRCA1-228ENST00000618469 TMEM260Q9NX78 707 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 YBX2Q9Y2T7 364 aaKnown RBP18.3■□□□□ 0.52
BRCA1-228ENST00000618469 CHD9Q3L8U1 2897 aa18.3■□□□□ 0.52
BRCA1-228ENST00000618469 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
BRCA1-228ENST00000618469 RABGGTBP53611 331 aa18.29■□□□□ 0.52
BRCA1-228ENST00000618469 AP3B2Q13367 1082 aa18.29■□□□□ 0.52
BRCA1-228ENST00000618469 NBPF20Q3BBV1 942 aa18.29■□□□□ 0.52
BRCA1-228ENST00000618469 HSDL1Q3SXM5 330 aa18.29■□□□□ 0.52
BRCA1-228ENST00000618469 TEX2Q8IWB9 1127 aa18.29■□□□□ 0.52
BRCA1-228ENST00000618469 TRPV6Q9H1D0 765 aa18.29■□□□□ 0.52
BRCA1-228ENST00000618469 MLXIPQ9HAP2 919 aa18.29■□□□□ 0.52
BRCA1-228ENST00000618469 UMODL1Q5DID0 1318 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 SPATA31C2B4DYI2 1134 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 FOSP01100 380 aaPredicted RBP18.28■□□□□ 0.52
BRCA1-228ENST00000618469 MYOGP15173 224 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 AK2P54819 239 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 RASIP1Q5U651 963 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 CPLX2Q6PUV4 134 aaKnown RBP18.28■□□□□ 0.52
BRCA1-228ENST00000618469 OTOP2Q7RTS6 562 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 TMEM199Q8N511 208 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 CCDC148Q8NFR7 591 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 GPRASP2Q96D09 838 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 IL17RAQ96F46 866 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 C6orf50Q9HD87 102 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 TRMT13Q9NUP7 481 aaKnown RBP18.28■□□□□ 0.52
BRCA1-228ENST00000618469 VPS54Q9P1Q0 977 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 MSRAQ9UJ68 235 aa18.28■□□□□ 0.52
BRCA1-228ENST00000618469 TANC1Q9C0D5 1861 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 NCOR1O75376 2440 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 NOP56O00567 594 aaKnown RBP18.27■□□□□ 0.52
BRCA1-228ENST00000618469 F2P00734 622 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 ITGB5P18084 799 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 CLK2P49760 499 aaKnown RBP18.27■□□□□ 0.52
BRCA1-228ENST00000618469 SP4Q02446 784 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 SSRP1Q08945 709 aaKnown RBP18.27■□□□□ 0.52
BRCA1-228ENST00000618469 MTMR1Q13613 665 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 NEDD9Q14511 834 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 ANKRD1Q15327 319 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 JAKMIP3Q5VZ66 844 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 NFRKBQ6P4R8 1299 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 METTL7BQ6UX53 244 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 CYFIP1Q7L576 1253 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 REXO1Q8N1G1 1221 aaKnown RBP18.27■□□□□ 0.52
BRCA1-228ENST00000618469 KAT2BQ92831 832 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 CDHR1Q96JP9 859 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 KATNAL1Q9BW62 490 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 ZMYND12Q9H0C1 365 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 SLKQ9H2G2 1235 aaPredicted RBP18.27■□□□□ 0.52
BRCA1-228ENST00000618469 HIPK3Q9H422 1215 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 BCAS3Q9H6U6 928 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 PKD2L1Q9P0L9 805 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 TPCN1Q9ULQ1 816 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 UBIAD1Q9Y5Z9 338 aa18.27■□□□□ 0.52
BRCA1-228ENST00000618469 HOXD8P13378 290 aaPredicted RBP18.26■□□□□ 0.51
BRCA1-228ENST00000618469 SREBF1P36956 1147 aa18.26■□□□□ 0.51
BRCA1-228ENST00000618469 KCNQ1P51787 676 aa18.26■□□□□ 0.51
BRCA1-228ENST00000618469 CCL23P55773 120 aa18.26■□□□□ 0.51
BRCA1-228ENST00000618469 SCRN1Q12765 414 aa18.26■□□□□ 0.51
BRCA1-228ENST00000618469 MFSD10Q14728 455 aa18.26■□□□□ 0.51
BRCA1-228ENST00000618469 ALG1Q9BT22 464 aa18.26■□□□□ 0.51
BRCA1-228ENST00000618469 CHD7Q9P2D1 2997 aa18.25■□□□□ 0.51
BRCA1-228ENST00000618469 RFXAPO00287 272 aa18.25■□□□□ 0.51
BRCA1-228ENST00000618469 ADAMTS3O15072 1205 aa18.25■□□□□ 0.51
BRCA1-228ENST00000618469 CDKL5O76039 1030 aa18.25■□□□□ 0.51
BRCA1-228ENST00000618469 DEXIO95424 95 aa18.25■□□□□ 0.51
BRCA1-228ENST00000618469 GNA11P29992 359 aa18.25■□□□□ 0.51
BRCA1-228ENST00000618469 PSEN2P49810 448 aa18.25■□□□□ 0.51
BRCA1-228ENST00000618469 PTPN11Q06124 597 aaPredicted RBP18.25■□□□□ 0.51
BRCA1-228ENST00000618469 SKIV2LQ15477 1246 aaKnown RBP18.25■□□□□ 0.51
BRCA1-228ENST00000618469 PSRC1Q6PGN9 363 aaPredicted RBP18.25■□□□□ 0.51
BRCA1-228ENST00000618469 SENP7Q9BQF6 1050 aa18.25■□□□□ 0.51
BRCA1-228ENST00000618469 NOC4LQ9BVI4 516 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms