RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RGL1Q9NZL6 768 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 TBC1D7Q9P0N9 293 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 DNM3Q9UQ16 869 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 SSC5DA1L4H1 1573 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 ARHGAP6O43182 974 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 CHMP2AO43633 222 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 ARP10275 920 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 CASP14P31944 242 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 FAM26FQ5R3K3 315 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 OTOP1Q7RTM1 612 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 FGFBP2Q9BYJ0 223 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 AS3MTQ9HBK9 375 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 STK24Q9Y6E0 443 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 ZHX2Q9Y6X8 837 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 SBF1O95248 1867 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 STX10O60499 249 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 KRT18P05783 430 aaKnown RBP19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 TPM2P07951 284 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 FXR1P51114 621 aaKnown RBP eCLIP19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 CCDC65Q8IXS2 484 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 WNK4Q96J92 1243 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 PANX2Q96RD6 677 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 TUBGCP2Q9BSJ2 902 aa19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 POLR3CQ9BUI4 534 aaPredicted RBP19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 CTDP1Q9Y5B0 961 aaPredicted RBP19.3■□□□□ 0.68
PCDHGC3-205ENST00000617641 MFAP3LO75121 409 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 HMGCS2P54868 508 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 MCF2L2Q86YR7 1114 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 MB21D1Q8N884 522 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 IL31RAQ8NI17 732 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 ZNF592Q92610 1267 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 ATG4CQ96DT6 458 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 KLRG1Q96E93 195 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 RPTORQ8N122 1335 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 B4DLN1 442 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 GAS7O60861 476 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 DDNO94850 711 aaPredicted RBP19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 PPP2R5CQ13362 524 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 PRKG1Q13976 671 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 FAM114A1Q8IWE2 563 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 SYT2Q8N9I0 419 aaPredicted RBP19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 MYRIPQ8NFW9 859 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 ZNF507Q8TCN5 953 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 ZNF577Q9BSK1 485 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 PARP14Q460N5 1801 aa19.29■□□□□ 0.68
PCDHGC3-205ENST00000617641 NKRFO15226 690 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 ZBED4O75132 1171 aa19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 MTIF2P46199 727 aaKnown RBP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 CTTNQ14247 550 aaKnown RBP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 HERC4Q5GLZ8 1057 aaPredicted RBP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 MYOCDQ8IZQ8 938 aa19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 MXRA8Q9BRK3 442 aa19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 ZHX3Q9H4I2 956 aa19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 PCDHA2Q9Y5H9 948 aa19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 RBBP6Q7Z6E9 1792 aaKnown RBP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 POLR2AP24928 1970 aaKnown RBP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 RNF225M0QZC1 329 aaPredicted RBP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 VWA5AO00534 786 aa19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 SETQ01105 290 aaPredicted RBP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 SYTL5Q8TDW5 730 aaPredicted RBP19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 DYDC2Q96IM9 177 aa19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 PPP2R3BQ9Y5P8 575 aa19.28■□□□□ 0.68
PCDHGC3-205ENST00000617641 PHIPQ8WWQ0 1821 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 PITPNM2Q9BZ72 1349 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 ITGB5P18084 799 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 HOXA7P31268 230 aaPredicted RBP19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 GHRHRQ02643 423 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 GIT2Q14161 759 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 DLK2Q6UY11 383 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 TOGARAM2Q6ZUX3 1019 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 HSD17B14Q9BPX1 270 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 BHMT2Q9H2M3 363 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 UNC45AQ9H3U1 944 aa19.27■□□□□ 0.68
PCDHGC3-205ENST00000617641 FRMD3A2A2Y4 597 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 RIOK3O14730 519 aaKnown RBP19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 TPM1P09493 284 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 LRRC63Q05C16 580 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 CNGA4Q8IV77 575 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 REEP2Q9BRK0 252 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 SOWAHDA6NJG2 315 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 IPO5O00410 1097 aaKnown RBP19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 SLITRK3O94933 977 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 RPS6P62753 249 aaKnown RBP19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 MTF1Q14872 753 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 MIIPQ5JXC2 388 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 TPH2Q8IWU9 490 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 PIGOQ8TEQ8 1089 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 TRERF1Q96PN7 1200 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 TUFT1Q9NNX1 390 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 PKD2L1Q9P0L9 805 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 PPP2R2CQ9Y2T4 447 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 RABGAP1Q9Y3P9 1069 aa19.26■□□□□ 0.67
PCDHGC3-205ENST00000617641 EYA4O95677 639 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 DNM2P50570 870 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 TRIM14Q14142 442 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 LRRC55Q6ZSA7 311 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 REXO1L1PQ8IX06 675 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 NELFCDQ8IXH7 590 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 TAAR1Q96RJ0 339 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms