RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-204ENST00000606347 CLIP3Q96DZ5 547 aa5.59□□□□□ -1.51
UCHL3-204ENST00000606347 TTPALQ9BTX7 342 aa5.59□□□□□ -1.51
UCHL3-204ENST00000606347 DTLQ9NZJ0 730 aa5.59□□□□□ -1.51
UCHL3-204ENST00000606347 WHRNQ9P202 907 aa5.59□□□□□ -1.51
UCHL3-204ENST00000606347 WASF3Q9UPY6 502 aa5.59□□□□□ -1.51
UCHL3-204ENST00000606347 EFR3BQ9Y2G0 817 aa5.59□□□□□ -1.51
UCHL3-204ENST00000606347 REXO2Q9Y3B8 237 aaKnown RBP5.59□□□□□ -1.51
UCHL3-204ENST00000606347 ERBB2P04626 1255 aa5.58□□□□□ -1.52
UCHL3-204ENST00000606347 EPHX1P07099 455 aa5.58□□□□□ -1.52
UCHL3-204ENST00000606347 COL6A1P12109 1028 aa5.58□□□□□ -1.52
UCHL3-204ENST00000606347 FBLP22087 321 aaKnown RBP5.58□□□□□ -1.52
UCHL3-204ENST00000606347 FPR2P25090 351 aa5.58□□□□□ -1.52
UCHL3-204ENST00000606347 COL9A2Q14055 689 aaPredicted RBP5.58□□□□□ -1.52
UCHL3-204ENST00000606347 PHF19Q5T6S3 580 aa5.58□□□□□ -1.52
UCHL3-204ENST00000606347 ZNF654Q8IZM8 581 aa5.58□□□□□ -1.52
UCHL3-204ENST00000606347 ZNF513Q8N8E2 541 aaPredicted RBP5.58□□□□□ -1.52
UCHL3-204ENST00000606347 NEIL1Q96FI4 390 aaPredicted RBP5.58□□□□□ -1.52
UCHL3-204ENST00000606347 SCAMP3O14828 347 aaKnown RBP5.57□□□□□ -1.52
UCHL3-204ENST00000606347 RAD17O75943 681 aa5.57□□□□□ -1.52
UCHL3-204ENST00000606347 KLHL18O94889 574 aa5.57□□□□□ -1.52
UCHL3-204ENST00000606347 GNPTABQ3T906 1256 aa5.57□□□□□ -1.52
UCHL3-204ENST00000606347 ADAT2Q7Z6V5 191 aaKnown RBP5.57□□□□□ -1.52
UCHL3-204ENST00000606347 C19orf47Q8N9M1 422 aaKnown RBP5.57□□□□□ -1.52
UCHL3-204ENST00000606347 ARRDC4Q8NCT1 418 aa5.57□□□□□ -1.52
UCHL3-204ENST00000606347 FAM89AQ96GI7 184 aa5.57□□□□□ -1.52
UCHL3-204ENST00000606347 SHDQ96IW2 340 aa5.57□□□□□ -1.52
UCHL3-204ENST00000606347 FGD4Q96M96 766 aa5.57□□□□□ -1.52
UCHL3-204ENST00000606347 PHAXQ9H814 394 aaKnown RBP5.57□□□□□ -1.52
UCHL3-204ENST00000606347 CGGBP1Q9UFW8 167 aaPredicted RBP5.57□□□□□ -1.52
UCHL3-204ENST00000606347 PLS3P13797 630 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 KRT4P19013 534 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 ACRV1P26436 265 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 CSF2RBP32927 897 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 GJA8P48165 433 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 EIF6P56537 245 aaKnown RBP5.56□□□□□ -1.52
UCHL3-204ENST00000606347 FSTL1Q12841 308 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 MROH9Q5TGP6 573 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 POLNQ7Z5Q5 900 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 ARHGEF39Q8N4T4 335 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 GPRASP2Q96D09 838 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 RBPJLQ9UBG7 517 aa5.56□□□□□ -1.52
UCHL3-204ENST00000606347 LRG1P02750 347 aa5.55□□□□□ -1.52
UCHL3-204ENST00000606347 HDLBPQ00341 1268 aaKnown RBP5.55□□□□□ -1.52
UCHL3-204ENST00000606347 SLC7A5Q01650 507 aa5.55□□□□□ -1.52
UCHL3-204ENST00000606347 COL10A1Q03692 680 aa5.55□□□□□ -1.52
UCHL3-204ENST00000606347 ZKSCAN2Q63HK3 967 aa5.55□□□□□ -1.52
UCHL3-204ENST00000606347 HEATR6Q6AI08 1181 aaKnown RBP5.55□□□□□ -1.52
UCHL3-204ENST00000606347 FAM169BQ8N8A8 192 aa5.55□□□□□ -1.52
UCHL3-204ENST00000606347 PRRX2Q99811 253 aa5.55□□□□□ -1.52
UCHL3-204ENST00000606347 GBP3Q9H0R5 595 aa5.55□□□□□ -1.52
UCHL3-204ENST00000606347 RAC3P60763 192 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 ZNF568Q3ZCX4 644 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 MAMDC4Q6UXC1 1216 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 RIOX2Q8IUF8 465 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 AJUBAQ96IF1 538 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 OR14A2Q96R54 314 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 CRBNQ96SW2 442 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 MMP19Q99542 508 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 GPRC5CQ9NQ84 441 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 APEX2Q9UBZ4 518 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 ZNF652Q9Y2D9 606 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 PTPN22Q9Y2R2 807 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 SLC12A7Q9Y666 1083 aa5.54□□□□□ -1.52
UCHL3-204ENST00000606347 PPM1BO75688 479 aa5.53□□□□□ -1.52
UCHL3-204ENST00000606347 GRB10Q13322 594 aa5.53□□□□□ -1.52
UCHL3-204ENST00000606347 INF2Q27J81 1249 aa5.53□□□□□ -1.52
UCHL3-204ENST00000606347 CEP68Q76N32 757 aa5.53□□□□□ -1.52
UCHL3-204ENST00000606347 NT5DC4Q86YG4 428 aa5.53□□□□□ -1.52
UCHL3-204ENST00000606347 ZNF808Q8N4W9 903 aaPredicted RBP5.53□□□□□ -1.52
UCHL3-204ENST00000606347 OR6P1Q8NGX9 317 aa5.53□□□□□ -1.52
UCHL3-204ENST00000606347 TRMT2BQ96GJ1 504 aaKnown RBP5.53□□□□□ -1.52
UCHL3-204ENST00000606347 RCC1LQ96I51 464 aaKnown RBP5.53□□□□□ -1.52
UCHL3-204ENST00000606347 SPATA32Q96LK8 384 aa5.53□□□□□ -1.52
UCHL3-204ENST00000606347 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.53□□□□□ -1.52
UCHL3-204ENST00000606347 TCRBV5S2A0A599 114 aa5.52□□□□□ -1.53
UCHL3-204ENST00000606347 FOXN1O15353 648 aa5.52□□□□□ -1.53
UCHL3-204ENST00000606347 NASPP49321 788 aaPredicted RBP5.52□□□□□ -1.53
UCHL3-204ENST00000606347 CASP7P55210 303 aa5.52□□□□□ -1.53
UCHL3-204ENST00000606347 CYP4F3Q08477 520 aa5.52□□□□□ -1.53
UCHL3-204ENST00000606347 Q6ZPA2 131 aa5.52□□□□□ -1.53
UCHL3-204ENST00000606347 ULK2Q8IYT8 1036 aa5.52□□□□□ -1.53
UCHL3-204ENST00000606347 SLC2A4RGQ9NR83 387 aa5.52□□□□□ -1.53
UCHL3-204ENST00000606347 KIAA1522Q9P206 1035 aaPredicted RBP5.52□□□□□ -1.53
UCHL3-204ENST00000606347 PCDHB4Q9Y5E5 795 aa5.52□□□□□ -1.53
UCHL3-204ENST00000606347 MASP2O00187 686 aa5.51□□□□□ -1.53
UCHL3-204ENST00000606347 HGSO14964 777 aaPredicted RBP5.51□□□□□ -1.53
UCHL3-204ENST00000606347 NUDT3O95989 172 aa5.51□□□□□ -1.53
UCHL3-204ENST00000606347 ZNF888P0CJ79 500 aaPredicted RBP5.51□□□□□ -1.53
UCHL3-204ENST00000606347 ITGB6P18564 788 aa5.51□□□□□ -1.53
UCHL3-204ENST00000606347 DNAJA1P31689 397 aaKnown RBP5.51□□□□□ -1.53
UCHL3-204ENST00000606347 RPL11P62913 178 aaKnown RBP5.51□□□□□ -1.53
UCHL3-204ENST00000606347 SMAD2Q15796 467 aaKnown RBP5.51□□□□□ -1.53
UCHL3-204ENST00000606347 KIAA1211LQ6NV74 962 aa5.51□□□□□ -1.53
UCHL3-204ENST00000606347 COPS5Q92905 334 aa5.51□□□□□ -1.53
UCHL3-204ENST00000606347 PTGFRNQ9P2B2 879 aa5.51□□□□□ -1.53
UCHL3-204ENST00000606347 OAZ3Q9UMX2 235 aa5.51□□□□□ -1.53
UCHL3-204ENST00000606347 SLC30A1Q9Y6M5 507 aa5.51□□□□□ -1.53
UCHL3-204ENST00000606347 ZBTB7CA1YPR0 619 aa5.5□□□□□ -1.53
UCHL3-204ENST00000606347 CR2P20023 1033 aa5.5□□□□□ -1.53
UCHL3-204ENST00000606347 HIBADHP31937 336 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms