RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 NLRP3Q96P20 1036 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 OPTNQ96CV9 577 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-218ENST00000601538 BUB1O43683 1085 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 ZC3H12BQ5HYM0 836 aaKnown RBP13.15□□□□□ -0.3
SHANK2-218ENST00000601538 AZI2Q9H6S1 392 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 MRPL47Q9HD33 250 aaKnown RBP13.15□□□□□ -0.3
SHANK2-218ENST00000601538 UTP6Q9NYH9 597 aaKnown RBP13.15□□□□□ -0.3
SHANK2-218ENST00000601538 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
SHANK2-218ENST00000601538 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-218ENST00000601538 FAM107AO95990 144 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 AGGF1Q8N302 714 aaeCLIP13.14□□□□□ -0.312e-7■■■■■ 29.6
SHANK2-218ENST00000601538 SETDB2Q96T68 719 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 SENP1Q9P0U3 644 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 TOM1L1O75674 476 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 DDX5P17844 614 aaKnown RBP13.14□□□□□ -0.31
SHANK2-218ENST00000601538 TCP11X2Q5H9J9 407 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 CABP7Q86V35 215 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 TRIM63Q969Q1 353 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 SLC38A10Q9HBR0 1119 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 WDR47O94967 919 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 PKD2L2Q9NZM6 624 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 TRAF3IP3Q9Y228 551 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 ADGRL3Q9HAR2 1447 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 C16orf96A6NNT2 1141 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 PAMP19021 973 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 CDC37L1Q7L3B6 337 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 ZNF233A6NK53 670 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 ZNF189O75820 626 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-218ENST00000601538 MAP4P27816 1152 aaKnown RBP13.14□□□□□ -0.31
SHANK2-218ENST00000601538 PAPOLAP51003 745 aaKnown RBP13.14□□□□□ -0.31
SHANK2-218ENST00000601538 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 ITFG2Q969R8 447 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 L2HGDHQ9H9P8 463 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 TXKP42681 527 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 MAST3O60307 1309 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 NINQ8N4C6 2090 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 RFC4P35249 363 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 PTK2Q05397 1052 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 CRELD2Q6UXH1 353 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-218ENST00000601538 TTLL11Q8NHH1 800 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 DCDC2Q9UHG0 476 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 M0QZ92 97 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 SAT1P21673 171 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 CYTH2Q99418 400 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 CNGB3Q9NQW8 809 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 HESX1Q9UBX0 185 aa13.14□□□□□ -0.31
SHANK2-218ENST00000601538 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
SHANK2-218ENST00000601538 NDUFA5Q16718 116 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 EXOC3L4Q17RC7 722 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 CFAP36Q96G28 342 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 ATP6V1G3Q96LB4 118 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 GOLGA8TH3BQL2 631 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 CROCCP3Q8IVE0 287 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 PDIK1LQ8N165 341 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 ZNF513Q8N8E2 541 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-218ENST00000601538 SYBUQ9NX95 663 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 KIAA0232Q92628 1395 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 YARSP54577 528 aaKnown RBP13.13□□□□□ -0.31
SHANK2-218ENST00000601538 TAF1BQ53T94 588 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-218ENST00000601538 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-218ENST00000601538 KRT16P08779 473 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 DR1Q01658 176 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 PICALMQ13492 652 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 ZBTB41Q5SVQ8 909 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 HDDC2Q7Z4H3 204 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 TMEM191CA6NGB0 347 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 H7C0C1 242 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 TMEM191BP0C7N4 346 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 ATP5OP48047 213 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 KIRREL3Q8IZU9 778 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 CASP10Q92851 521 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 CHMP6Q96FZ7 201 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-218ENST00000601538 GOLGA8RI6L899 631 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 KRT19P08727 400 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 LUZP2Q86TE4 346 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 NOSTRINQ8IVI9 506 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 DEPDC1BQ8WUY9 529 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 ST7Q9NRC1 585 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 LRIG3Q6UXM1 1119 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 PLEKHM3Q6ZWE6 761 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
SHANK2-218ENST00000601538 C19orf60Q96EN9 201 aa13.13□□□□□ -0.31
SHANK2-218ENST00000601538 CDH2P19022 906 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-218ENST00000601538 NFKBIAP25963 317 aa13.12□□□□□ -0.31
SHANK2-218ENST00000601538 APPBP2Q92624 585 aa13.12□□□□□ -0.31
SHANK2-218ENST00000601538 GOLGA8MH3BSY2 632 aa13.12□□□□□ -0.31
SHANK2-218ENST00000601538 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-218ENST00000601538 AARSP49588 968 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHANK2-218ENST00000601538 TBCCQ15814 346 aa13.12□□□□□ -0.31
SHANK2-218ENST00000601538 TRAPPC9Q96Q05 1148 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms