RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 MMP3P08254 477 aa23.08■■□□□ 1.29
PNKP-211ENST00000598020 PDCP20941 246 aa23.08■■□□□ 1.29
PNKP-211ENST00000598020 PRR16Q569H4 304 aa23.08■■□□□ 1.29
PNKP-211ENST00000598020 CYFIP1Q7L576 1253 aa23.08■■□□□ 1.29
PNKP-211ENST00000598020 SPATA33Q96N06 139 aa23.08■■□□□ 1.29
PNKP-211ENST00000598020 SENP6Q9GZR1 1112 aaPredicted RBP23.08■■□□□ 1.29
PNKP-211ENST00000598020 DOCK5Q9H7D0 1870 aa23.08■■□□□ 1.29
PNKP-211ENST00000598020 A0A1W2PQ45 241 aaPredicted RBP23.07■■□□□ 1.28
PNKP-211ENST00000598020 A0A1W2PQY0 241 aa23.07■■□□□ 1.28
PNKP-211ENST00000598020 FAM205CA6NFA0 338 aa23.07■■□□□ 1.28
PNKP-211ENST00000598020 PURAQ00577 322 aaKnown RBP23.07■■□□□ 1.28
PNKP-211ENST00000598020 ITGB3BPQ13352 177 aaPredicted RBP23.07■■□□□ 1.28
PNKP-211ENST00000598020 DGKDQ16760 1214 aa23.07■■□□□ 1.28
PNKP-211ENST00000598020 LETM2Q2VYF4 491 aa23.07■■□□□ 1.28
PNKP-211ENST00000598020 HSDL1Q3SXM5 330 aa23.07■■□□□ 1.28
PNKP-211ENST00000598020 C1orf53Q5VUE5 145 aa23.07■■□□□ 1.28
PNKP-211ENST00000598020 NOSTRINQ8IVI9 506 aa23.07■■□□□ 1.28
PNKP-211ENST00000598020 GLT1D1Q96MS3 346 aa23.07■■□□□ 1.28
PNKP-211ENST00000598020 H3BQV1 296 aa23.06■■□□□ 1.28
PNKP-211ENST00000598020 IPO5O00410 1097 aaKnown RBP23.06■■□□□ 1.28
PNKP-211ENST00000598020 DHX15O43143 795 aaKnown RBP23.06■■□□□ 1.28
PNKP-211ENST00000598020 TDP2O95551 362 aa23.06■■□□□ 1.28
PNKP-211ENST00000598020 SNX17Q15036 470 aa23.06■■□□□ 1.28
PNKP-211ENST00000598020 CXCL17Q6UXB2 119 aa23.06■■□□□ 1.28
PNKP-211ENST00000598020 GPR20Q99678 358 aa23.06■■□□□ 1.28
PNKP-211ENST00000598020 SDF4Q9BRK5 362 aa23.06■■□□□ 1.28
PNKP-211ENST00000598020 TBC1D22BQ9NU19 505 aa23.06■■□□□ 1.28
PNKP-211ENST00000598020 SCN10AQ9Y5Y9 1956 aa23.05■■□□□ 1.28
PNKP-211ENST00000598020 KIF28PB7ZC32 967 aa23.05■■□□□ 1.28
PNKP-211ENST00000598020 SLC39A5Q6ZMH5 540 aa23.05■■□□□ 1.28
PNKP-211ENST00000598020 FERMT2Q96AC1 680 aa23.05■■□□□ 1.28
PNKP-211ENST00000598020 ZNF577Q9BSK1 485 aa23.05■■□□□ 1.28
PNKP-211ENST00000598020 MTG1Q9BT17 334 aaPredicted RBP23.05■■□□□ 1.28
PNKP-211ENST00000598020 HTATIP2Q9BUP3 242 aa23.05■■□□□ 1.28
PNKP-211ENST00000598020 SEZ6LQ9BYH1 1024 aa23.05■■□□□ 1.28
PNKP-211ENST00000598020 JPH1Q9HDC5 661 aaPredicted RBP23.05■■□□□ 1.28
PNKP-211ENST00000598020 STARD7Q9NQZ5 370 aa23.05■■□□□ 1.28
PNKP-211ENST00000598020 DDX25Q9UHL0 483 aaKnown RBP23.05■■□□□ 1.28
PNKP-211ENST00000598020 MSH4O15457 936 aa23.04■■□□□ 1.28
PNKP-211ENST00000598020 MYL3P08590 195 aa23.04■■□□□ 1.28
PNKP-211ENST00000598020 TRAPPC10P48553 1259 aa23.04■■□□□ 1.28
PNKP-211ENST00000598020 GNL2Q13823 731 aaKnown RBP23.04■■□□□ 1.28
PNKP-211ENST00000598020 SLC5A5Q92911 643 aa23.04■■□□□ 1.28
PNKP-211ENST00000598020 RIT2Q99578 217 aa23.04■■□□□ 1.28
PNKP-211ENST00000598020 PKD2L1Q9P0L9 805 aa23.04■■□□□ 1.28
PNKP-211ENST00000598020 SLC9A2Q9UBY0 812 aa23.04■■□□□ 1.28
PNKP-211ENST00000598020 NOP56O00567 594 aaKnown RBP23.03■■□□□ 1.28
PNKP-211ENST00000598020 TBX3O15119 743 aa23.03■■□□□ 1.28
PNKP-211ENST00000598020 SORBS3O60504 671 aa23.03■■□□□ 1.28
PNKP-211ENST00000598020 CCNT1O60563 726 aaKnown RBP23.03■■□□□ 1.28
PNKP-211ENST00000598020 ETNPPLQ8TBG4 499 aa23.03■■□□□ 1.28
PNKP-211ENST00000598020 SEPT1Q8WYJ6 367 aa23.03■■□□□ 1.28
PNKP-211ENST00000598020 KCNMB3Q9NPA1 279 aa23.03■■□□□ 1.28
PNKP-211ENST00000598020 SLC37A4O43826 429 aa23.02■■□□□ 1.28
PNKP-211ENST00000598020 SYT1P21579 422 aa23.02■■□□□ 1.28
PNKP-211ENST00000598020 ORC2Q13416 577 aaPredicted RBP23.02■■□□□ 1.28
PNKP-211ENST00000598020 SLC43A3Q8NBI5 491 aa23.02■■□□□ 1.28
PNKP-211ENST00000598020 KAT2BQ92831 832 aa23.02■■□□□ 1.28
PNKP-211ENST00000598020 FAM20AQ96MK3 541 aa23.02■■□□□ 1.28
PNKP-211ENST00000598020 FOXD4L1Q9NU39 408 aa23.02■■□□□ 1.28
PNKP-211ENST00000598020 A0A0U1RQG5 324 aaPredicted RBP23.01■■□□□ 1.27
PNKP-211ENST00000598020 GSTTP1A0A1W2PQM5 241 aa23.01■■□□□ 1.27
PNKP-211ENST00000598020 ATG7O95352 703 aa23.01■■□□□ 1.27
PNKP-211ENST00000598020 F2P00734 622 aa23.01■■□□□ 1.27
PNKP-211ENST00000598020 PDIA4P13667 645 aaKnown RBP23.01■■□□□ 1.27
PNKP-211ENST00000598020 CDK7P50613 346 aa23.01■■□□□ 1.27
PNKP-211ENST00000598020 LRRC26Q2I0M4 334 aa23.01■■□□□ 1.27
PNKP-211ENST00000598020 C16orf70Q9BSU1 422 aa23.01■■□□□ 1.27
PNKP-211ENST00000598020 TELO2Q9Y4R8 837 aa23.01■■□□□ 1.27
PNKP-211ENST00000598020 ALPK3Q96L96 1907 aa23.01■■□□□ 1.27
PNKP-211ENST00000598020 PSMD10O75832 226 aa23■■□□□ 1.27
PNKP-211ENST00000598020 CCNE2O96020 404 aa23■■□□□ 1.27
PNKP-211ENST00000598020 LGALS2P05162 132 aa23■■□□□ 1.27
PNKP-211ENST00000598020 HSP90AA1P07900 732 aaKnown RBP23■■□□□ 1.27
PNKP-211ENST00000598020 ATN1P54259 1190 aaPredicted RBP23■■□□□ 1.27
PNKP-211ENST00000598020 ACTR2P61160 394 aa23■■□□□ 1.27
PNKP-211ENST00000598020 KRT76Q01546 638 aa23■■□□□ 1.27
PNKP-211ENST00000598020 MLLT1Q03111 559 aaPredicted RBP23■■□□□ 1.27
PNKP-211ENST00000598020 BECN1Q14457 450 aa23■■□□□ 1.27
PNKP-211ENST00000598020 MCTP1Q6DN14 999 aa23■■□□□ 1.27
PNKP-211ENST00000598020 ZNF746Q6NUN9 644 aaPredicted RBP23■■□□□ 1.27
PNKP-211ENST00000598020 VTI1AQ96AJ9 217 aa23■■□□□ 1.27
PNKP-211ENST00000598020 NOL7Q9UMY1 257 aaKnown RBP23■■□□□ 1.27
PNKP-211ENST00000598020 GRIN2DO15399 1336 aa23■■□□□ 1.27
PNKP-211ENST00000598020 ARVCFO00192 962 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 HAS3O00219 553 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 WNT7AO00755 349 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 TCF7P36402 384 aaPredicted RBP22.99■■□□□ 1.27
PNKP-211ENST00000598020 SP4Q02446 784 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 ITGA7Q13683 1181 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 B3GNT9Q6UX72 402 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 SMAP1Q8IYB5 467 aaPredicted RBP22.99■■□□□ 1.27
PNKP-211ENST00000598020 HAS1Q92839 578 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 TOX2Q96NM4 488 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 KATNAL1Q9BW62 490 aa22.99■■□□□ 1.27
PNKP-211ENST00000598020 MKI67P46013 3256 aaKnown RBP22.99■■□□□ 1.27
PNKP-211ENST00000598020 IGKV6D-21A0A0A0MT36 114 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 GAS7O60861 476 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 LGR5O75473 907 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 TOB1P50616 345 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms