RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 AP3B2Q13367 1082 aa18.93■□□□□ 0.62
SHKBP1-205ENST00000594973 PRR16Q569H4 304 aa18.93■□□□□ 0.62
SHKBP1-205ENST00000594973 BTNL9Q6UXG8 535 aa18.93■□□□□ 0.62
SHKBP1-205ENST00000594973 IRF2BP1Q8IU81 584 aa18.93■□□□□ 0.62
SHKBP1-205ENST00000594973 RAD54LQ92698 747 aa18.93■□□□□ 0.62
SHKBP1-205ENST00000594973 MYOZ2Q9NPC6 264 aa18.93■□□□□ 0.62
SHKBP1-205ENST00000594973 AKR1B15C9JRZ8 316 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 CCDC174Q6PII3 467 aa18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 NAP1L4Q99733 375 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 GLIS2Q9BZE0 524 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 SRCAPQ6ZRS2 3230 aa18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 LRRC10BA6NIK2 292 aa18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 PES1O00541 588 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 OPLAHO14841 1288 aa18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 IDEP14735 1019 aa18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 POLD1P28340 1107 aa18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 STAT3P40763 770 aa18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 MTMR14Q8NCE2 650 aa18.92■□□□□ 0.62
SHKBP1-205ENST00000594973 EGFRP00533 1210 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 SSBP05455 408 aaKnown RBP eCLIP18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 FKBP1CQ5VVH2 108 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 TTI2Q6NXR4 508 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 CNNM4Q6P4Q7 775 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 FAM83AQ86UY5 434 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 CSGALNACT2Q8N6G5 542 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 KIAA0895Q8NCT3 520 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 ARFGEF1Q9Y6D6 1849 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 CASP14P31944 242 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 TMEM119Q4V9L6 283 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 DHTKD1Q96HY7 919 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 KCNMB3Q9NPA1 279 aa18.91■□□□□ 0.62
SHKBP1-205ENST00000594973 CAP2P40123 477 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 USP8P40818 1118 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 UBXN1Q04323 297 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 ANKRD40Q6AI12 368 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 TOGARAM2Q6ZUX3 1019 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 DDX12PQ92771 950 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 P2RX5Q93086 422 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 SYNPO2Q9UMS6 1093 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 KIAA1024Q9UPX6 916 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 CYP3A7-CYP3A51PA0A087WV96 503 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 FAM86B1E9PN63 330 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 N4BP1O75113 896 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 GYPCP04921 128 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 FAM86B2P0C5J1 330 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 CYP3A7P24462 503 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 BRD2P25440 801 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 SEMA3FQ13275 785 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 BANK1Q8NDB2 785 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 DUSP9Q99956 384 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 BCS1LQ9Y276 419 aa18.9■□□□□ 0.62
SHKBP1-205ENST00000594973 NFKBIEO00221 500 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 TBC1D12O60347 775 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 CFBP00751 764 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 RASA3Q14644 834 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 CASP8Q14790 479 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 UNC13DQ70J99 1090 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 CRYGNQ8WXF5 182 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 ZBED3Q96IU2 234 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 VCPKMTQ9H867 229 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 ABCB6Q9NP58 842 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 MAGEC2Q9UBF1 373 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 CDC23Q9UJX2 597 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 POTEB3A0JP26 581 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 POTECB2RU33 542 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 E9PMD0 336 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 CCNE1P24864 410 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 MAP2K2P36507 400 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 FXR1P51114 621 aaKnown RBP eCLIP18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 POTEBQ6S5H4 581 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 CYP2W1Q8TAV3 490 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 TBC1D5Q92609 795 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 THAP9Q9H5L6 903 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 VIPAS39Q9H9C1 493 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 FBXO28Q9NVF7 368 aa18.89■□□□□ 0.61
SHKBP1-205ENST00000594973 BICDL2A1A5D9 508 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 SOWAHDA6NJG2 315 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 FOSP01100 380 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 SREBF1P36956 1147 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 MTF1Q14872 753 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 SLFN12Q8IYM2 578 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 PANX2Q96RD6 677 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 DESI2Q9BSY9 194 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 MFAP3LO75121 409 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 EEF1GP26641 437 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 ZNF76P36508 570 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 TNIP1Q15025 636 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 ETNPPLQ8TBG4 499 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 MBOAT7Q96N66 472 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 PNKPQ96T60 521 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 MTFR1LQ9H019 292 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 PGAP2Q9UHJ9 254 aa18.88■□□□□ 0.61
SHKBP1-205ENST00000594973 PVALEFA0A1B0GWK0 134 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 NCAPH2Q6IBW4 605 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 GLIS3Q8NEA6 775 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 CHURC1Q8WUH1 139 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 CCDC102AQ96A19 550 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 LENG9Q96B70 501 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 TACO1Q9BSH4 297 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 NT5C3AQ9H0P0 336 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms