RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 XRRA1Q6P2D8 792 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 STAMQ92783 540 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 UQCRHLA0A096LP55 91 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 F8W8V4 182 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 DPYSL4O14531 572 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 BRD1O95696 1058 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 IVLP07476 585 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 UQCRHP07919 91 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 SRGAP2CP0DJJ0 459 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 MARK3P27448 753 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 IFRD2Q12894 506 aaPredicted RBP11.16□□□□□ -0.62
MSI2-209ENST00000579483 LRMPQ12912 555 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 UBE2SQ16763 222 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
MSI2-209ENST00000579483 CDC42EP5Q6NZY7 148 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 INTS5Q6P9B9 1019 aaKnown RBP11.16□□□□□ -0.62
MSI2-209ENST00000579483 DAAM2Q86T65 1068 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 AFAP1L2Q8N4X5 818 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 VCPKMTQ9H867 229 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 MANSC4A6NHS7 340 aaPredicted RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 GH1P01241 217 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 P4HBP07237 508 aaKnown RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 SKIV2LQ15477 1246 aaKnown RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 ZNF569Q5MCW4 686 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 RNF139Q8WU17 664 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 KIAA1468Q9P260 1216 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 CPSF3Q9UKF6 684 aaKnown RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 TXNP10599 105 aaKnown RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 TSPY1Q01534 308 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 MORC3Q14149 939 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 LDHDQ86WU2 507 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 FAM186BQ8IYM0 893 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 NSUN7Q8NE18 718 aaKnown RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 NCAPGQ9BPX3 1015 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 A6NJR5 290 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 SRGNP10124 158 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 FKBP3Q00688 224 aaKnown RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 EXOC3L4Q17RC7 722 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 MUM1L1Q5H9M0 696 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 SECISBP2LQ93073 1101 aaKnown RBP11.15□□□□□ -0.62
MSI2-209ENST00000579483 MSTO1Q9BUK6 570 aa11.15□□□□□ -0.62
MSI2-209ENST00000579483 FAM196BA6NMK8 535 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 KCNJ18B7U540 433 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 PLA2G4BP0C869 781 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 USP11P51784 963 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 KCNJ12Q14500 433 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 NUDT18Q6ZVK8 323 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 BEST2Q8NFU1 509 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 RASGRP4Q8TDF6 673 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 TIGD1Q96MW7 591 aa11.15□□□□□ -0.63
MSI2-209ENST00000579483 ARPP19P56211 112 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 PSMC5P62195 406 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 QRICH1Q2TAL8 776 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 RRAGAQ7L523 313 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 PGBD4Q96DM1 585 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 FLT1P17948 1338 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 NR2F2P24468 414 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 QARSP47897 775 aaKnown RBP11.14□□□□□ -0.63
MSI2-209ENST00000579483 ITIH3Q06033 890 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 SCYL2Q6P3W7 929 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 SIX6OS1Q8N1H7 587 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 ARRDC4Q8NCT1 418 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 SMC1BQ8NDV3 1235 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 PCDHB4Q9Y5E5 795 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 MROH1Q8NDA8 1641 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 SNAP23O00161 211 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 STXBP3O00186 592 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 TRAPPC3O43617 180 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 SH3BP5O60239 455 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 ARHGAP4P98171 946 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 KARSQ15046 597 aaKnown RBP11.14□□□□□ -0.63
MSI2-209ENST00000579483 GPC2Q8N158 579 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 CCDC89Q8N998 374 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 MTRQ99707 1265 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 SLITRK6Q9H5Y7 841 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 MAFGO15525 162 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 CRCPO75575 148 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 SRGAP2BP0DMP2 458 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 AKR1B1P15121 316 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 PPP1R21Q6ZMI0 780 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 USP50Q70EL3 339 aaPredicted RBP11.14□□□□□ -0.63
MSI2-209ENST00000579483 GLT1D1Q96MS3 346 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 LZTFL1Q9NQ48 299 aa11.14□□□□□ -0.63
MSI2-209ENST00000579483 FAM207AQ9NSI2 230 aaPredicted RBP11.14□□□□□ -0.63
MSI2-209ENST00000579483 IPO11Q9UI26 975 aaKnown RBP11.14□□□□□ -0.63
MSI2-209ENST00000579483 CEMIPQ8WUJ3 1361 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 MAGEB2O15479 319 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 VIMP08670 466 aaKnown RBP11.13□□□□□ -0.63
MSI2-209ENST00000579483 MAPK4P31152 587 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 PEX26Q7Z412 305 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
MSI2-209ENST00000579483 MAP3K20Q9NYL2 800 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms