RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 BAG1Q99933 345 aaPredicted RBP12.37□□□□□ -0.43
SKA2-204ENST00000578519 EIF2AK1Q9BQI3 630 aaKnown RBP12.37□□□□□ -0.43
SKA2-204ENST00000578519 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 FBXO28Q9NVF7 368 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 MAPK8IP1Q9UQF2 711 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 COL4A3BPQ9Y5P4 624 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 IGLV3-22A0A075B6J6 115 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 PES1O00541 588 aaKnown RBP12.36□□□□□ -0.43
SKA2-204ENST00000578519 TBCAO75347 108 aaKnown RBP12.36□□□□□ -0.43
SKA2-204ENST00000578519 STAM2O75886 525 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 EGFRP00533 1210 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 TNNT1P13805 278 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 FKBP3Q00688 224 aaKnown RBP12.36□□□□□ -0.43
SKA2-204ENST00000578519 UBXN1Q04323 297 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 STK4Q13043 487 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 COASYQ13057 564 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 HSP90AA4PQ58FG1 418 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 PCNX4Q63HM2 1172 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 ARMCX5Q6P1M9 558 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 RNF207Q6ZRF8 634 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 NLRX1Q86UT6 975 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 CATSPER3Q86XQ3 398 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 CCAR2Q8N163 923 aaKnown RBP12.36□□□□□ -0.43
SKA2-204ENST00000578519 ZNF397Q8NF99 534 aaPredicted RBP12.36□□□□□ -0.43
SKA2-204ENST00000578519 LENG9Q96B70 501 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 CEP63Q96MT8 703 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 TRERF1Q96PN7 1200 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 MED15Q96RN5 788 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 GLIS2Q9BZE0 524 aaPredicted RBP12.36□□□□□ -0.43
SKA2-204ENST00000578519 VPS16Q9H269 839 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 TMX1Q9H3N1 280 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
SKA2-204ENST00000578519 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 ZNHIT6Q9NWK9 470 aaKnown RBP12.36□□□□□ -0.43
SKA2-204ENST00000578519 RNF181Q9P0P0 153 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 SEL1LQ9UBV2 794 aa12.36□□□□□ -0.43
SKA2-204ENST00000578519 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 LGALS16A8MUM7 142 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 POTECB2RU33 542 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 B4DLN1 442 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 E9PMD0 336 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 VWA5AO00534 786 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 ATP2A1O14983 1001 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 MED24O75448 989 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 PSMD10O75832 226 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 CYP11B2P19099 503 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 EPS15P42566 896 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 SPIRE1Q08AE8 756 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 SH3D19Q5HYK7 790 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 ARHGEF16Q5VV41 709 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 ANKRD40Q6AI12 368 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 USP50Q70EL3 339 aaPredicted RBP12.35□□□□□ -0.43
SKA2-204ENST00000578519 CCDC84Q86UT8 332 aaPredicted RBP12.35□□□□□ -0.43
SKA2-204ENST00000578519 TMTC1Q8IUR5 882 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 MB21D1Q8N884 522 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 TRPM4Q8TD43 1214 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 ZC3H15Q8WU90 426 aaKnown RBP12.35□□□□□ -0.43
SKA2-204ENST00000578519 CLEC4DQ8WXI8 215 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 DNAJC19Q96DA6 116 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 CDHR1Q96JP9 859 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 TUBGCP2Q9BSJ2 902 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
SKA2-204ENST00000578519 FHDC1Q9C0D6 1143 aaPredicted RBP12.35□□□□□ -0.43
SKA2-204ENST00000578519 JADE2Q9NQC1 790 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 TAB2Q9NYJ8 693 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 FBXO40Q9UH90 709 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 ZNF536O15090 1300 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 RPTORQ8N122 1335 aa12.35□□□□□ -0.43
SKA2-204ENST00000578519 IPO5O00410 1097 aaKnown RBP12.34□□□□□ -0.43
SKA2-204ENST00000578519 CALUO43852 315 aaPredicted RBP12.34□□□□□ -0.43
SKA2-204ENST00000578519 FCER1AP12319 257 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 RPL13P26373 211 aaKnown RBP12.34□□□□□ -0.43
SKA2-204ENST00000578519 CCND2P30279 289 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 SFNP31947 248 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 COPB2P35606 906 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 PBX1P40424 430 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 STAT3P40763 770 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 SLC12A3P55017 1021 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 PPP2R3AQ06190 1150 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 TBC1D8BQ0IIM8 1120 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 CEP135Q66GS9 1140 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 RDM1Q8NG50 284 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 KIF18AQ8NI77 898 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 SYTL5Q8TDW5 730 aaPredicted RBP12.34□□□□□ -0.43
SKA2-204ENST00000578519 TBC1D5Q92609 795 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 CNOT6LQ96LI5 555 aaKnown RBP12.34□□□□□ -0.43
SKA2-204ENST00000578519 MPHOSPH6Q99547 160 aaKnown RBP12.34□□□□□ -0.43
SKA2-204ENST00000578519 DUSP9Q99956 384 aaKnown RBP12.34□□□□□ -0.43
SKA2-204ENST00000578519 TIPINQ9BVW5 301 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 ZHX3Q9H4I2 956 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 UBIAD1Q9Y5Z9 338 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms