RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
USP43-204ENST00000573955 TMCO3Q6UWJ1 677 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 MTMR14Q8NCE2 650 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 DDX12PQ92771 950 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 EIF3CQ99613 913 aaKnown RBP17.73■□□□□ 0.43
USP43-204ENST00000573955 ZNF341Q9BYN7 854 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 VCPKMTQ9H867 229 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 ARGLU1Q9NWB6 273 aaPredicted RBP17.73■□□□□ 0.43
USP43-204ENST00000573955 H7C1D1 291 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 CASP14P31944 242 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 ANKRD40Q6AI12 368 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 LEKR1Q6ZMV7 388 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 CSGALNACT2Q8N6G5 542 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 ZBED3Q96IU2 234 aaPredicted RBP17.73■□□□□ 0.43
USP43-204ENST00000573955 AKR1B15C9JRZ8 316 aaPredicted RBP17.72■□□□□ 0.43
USP43-204ENST00000573955 ZNF76P36508 570 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 LRRC41Q15345 812 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 TMEM119Q4V9L6 283 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 NCAPH2Q6IBW4 605 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 TTI2Q6NXR4 508 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 GLIS3Q8NEA6 775 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 KCNMB3Q9NPA1 279 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 OAS2P29728 719 aaKnown RBP17.72■□□□□ 0.43
USP43-204ENST00000573955 PBX1P40424 430 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 LMAN1P49257 510 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 UBXN1Q04323 297 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 MTF1Q14872 753 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 TNIP1Q15025 636 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 FKBP1CQ5VVH2 108 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 TOGARAM2Q6ZUX3 1019 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 P2RX5Q93086 422 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 DUSP9Q99956 384 aaKnown RBP17.72■□□□□ 0.43
USP43-204ENST00000573955 DESI2Q9BSY9 194 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 TBC1D7Q9P0N9 293 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 PGAP2Q9UHJ9 254 aa17.72■□□□□ 0.43
USP43-204ENST00000573955 NPHP3-ACAD11A0A0J9YXS1 232 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 ERCC3P19447 782 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 SPAG1Q07617 926 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 ERCC6LQ2NKX8 1250 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 PSD3Q9NYI0 1048 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 POTEFA5A3E0 1075 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 SOWAHDA6NJG2 315 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 MEIS1O00470 390 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 TBC1D12O60347 775 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 MED24O75448 989 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 GYPCP04921 128 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 POTEIP0CG38 1075 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 FXR1P51114 621 aaKnown RBP eCLIP17.71■□□□□ 0.43
USP43-204ENST00000573955 POTEGQ6S5H5 508 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 POTEEQ6S8J3 1075 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 EXOC4Q96A65 974 aa17.71■□□□□ 0.43
USP43-204ENST00000573955 NAP1L4Q99733 375 aaKnown RBP17.71■□□□□ 0.43
USP43-204ENST00000573955 KIF2AO00139 706 aaPredicted RBP17.7■□□□□ 0.42
USP43-204ENST00000573955 NKRFO15226 690 aaKnown RBP eCLIP17.7■□□□□ 0.42
USP43-204ENST00000573955 ZRANB2O95218 330 aaKnown RBP eCLIP17.7■□□□□ 0.42
USP43-204ENST00000573955 SREBF1P36956 1147 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 UNC13DQ70J99 1090 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 ETNPPLQ8TBG4 499 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 LENG9Q96B70 501 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 DHTKD1Q96HY7 919 aaPredicted RBP17.7■□□□□ 0.42
USP43-204ENST00000573955 ZCCHC17Q9NP64 241 aaKnown RBP17.7■□□□□ 0.42
USP43-204ENST00000573955 MAGEC2Q9UBF1 373 aaPredicted RBP17.7■□□□□ 0.42
USP43-204ENST00000573955 CNOT7Q9UIV1 285 aaKnown RBP17.7■□□□□ 0.42
USP43-204ENST00000573955 PCNTO95613 3336 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 TTC36A6NLP5 189 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 ARHGAP6O43182 974 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 ASNSP08243 561 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 CCNE1P24864 410 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 MAP9Q49MG5 647 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 CHURC1Q8WUH1 139 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
USP43-204ENST00000573955 CYP3A7-CYP3A51PA0A087WV96 503 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 RNF225M0QZC1 329 aaPredicted RBP17.69■□□□□ 0.42
USP43-204ENST00000573955 CYP3A7P24462 503 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 INPP5BP32019 993 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 CYP4A11Q02928 519 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 ZKSCAN8Q15776 578 aaPredicted RBP17.69■□□□□ 0.42
USP43-204ENST00000573955 SEMA6BQ9H3T3 888 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 LRRC10BA6NIK2 292 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 B4DLN1 442 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 MSH4O15457 936 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
USP43-204ENST00000573955 REXO1L1PQ8IX06 675 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 SLFN12Q8IYM2 578 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 AGBL1Q96MI9 1066 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 ZHX3Q9H4I2 956 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 PPP2R2CQ9Y2T4 447 aa17.69■□□□□ 0.42
USP43-204ENST00000573955 PHF20L1A8MW92 1017 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 STX10O60499 249 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 MFAP3LO75121 409 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 ILDR2Q71H61 639 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 TEPSINQ96N21 525 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 MBOAT7Q96N66 472 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 UBXN6Q9BZV1 441 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 THAP9Q9H5L6 903 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 SH2D4AQ9H788 454 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 KCND1Q9NSA2 647 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 HACL1Q9UJ83 578 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms