RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 FOXP2O15409 715 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 TREHO43280 583 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 PPFIA4O75335 1185 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 CTSHP09668 335 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 PDHBP11177 359 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 TOP1P11387 765 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 HOXC8P31273 242 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 ADGRD2Q7Z7M1 963 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 ATP6V0A1Q93050 837 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 IWS1Q96ST2 819 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 RMDN3Q96TC7 470 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 LRRCC1Q9C099 1032 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 TRPC6Q9Y210 931 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 RWDD3Q9Y3V2 267 aa12.26□□□□□ -0.45
CTDNEP1-202ENST00000570380 C17orf102A2RUQ5 167 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 PDGFBP01127 241 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 DNAJB1P25685 340 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 ZNF543Q08ER8 600 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 HSDL1Q3SXM5 330 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 MYSM1Q5VVJ2 828 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 EFHBQ8N7U6 833 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 RPGRIP1Q96KN7 1286 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 C16orf70Q9BSU1 422 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 PHF7Q9BWX1 381 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 PLAGL2Q9UPG8 496 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 USP15Q9Y4E8 981 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 MRVI1Q9Y6F6 885 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 ADGRA3Q8IWK6 1321 aa12.25□□□□□ -0.45
CTDNEP1-202ENST00000570380 GALR2O43603 387 aaPredicted RBP12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 ORC4O43929 436 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 SORBS3O60504 671 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 EIF3JO75822 258 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 GLP2RO95838 553 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 ICAM3P32942 547 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 NBL1P41271 181 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 ID4P47928 161 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 NUBP1P53384 320 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 APBB2Q92870 758 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 ZNF689Q96CS4 500 aaPredicted RBP12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 CPVLQ9H3G5 476 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 RNPEPQ9H4A4 650 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 ANAPC4Q9UJX5 808 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 BARX2Q9UMQ3 279 aaPredicted RBP12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 DNAH14Q0VDD8 3507 aa12.24□□□□□ -0.45
CTDNEP1-202ENST00000570380 GVINP1Q7Z2Y8 2422 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 CAND2O75155 1236 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 KDM4AO75164 1064 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 RGS20O76081 388 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 NR3C2P08235 984 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 FGRP09769 529 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 SMIM10L2AP0DMW4 78 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 SMIM10L2BP0DMW5 78 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 SNHG28P0DPA3 235 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 EIF2AK2P19525 551 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 BTG3Q14201 252 aaPredicted RBP12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 PTPN21Q16825 1174 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 CELF3Q5SZQ8 465 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 ARHGEF16Q5VV41 709 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 SPPL3Q8TCT6 385 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 P2RX5Q93086 422 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 RIPOR3Q96MK2 946 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 SPATA33Q96N06 139 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 PLVAPQ9BX97 442 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 MAF1Q9H063 256 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 CACNA1BQ00975 2339 aa12.23□□□□□ -0.45
CTDNEP1-202ENST00000570380 ABCB11O95342 1321 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 H3BRB1 525 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 ITGB1P05556 798 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 GOLGA8HP0CJ92 632 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 NRIP1P48552 1158 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 SP2Q02086 613 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 FAM26DQ5JW98 314 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 ZMYM1Q5SVZ6 1142 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 RBM23Q86U06 439 aaKnown RBP12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 SUSD6Q92537 303 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 PPP2R3CQ969Q6 453 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 TUT1Q9H6E5 874 aaKnown RBP12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 PXMP2Q9NR77 195 aa12.22□□□□□ -0.45
CTDNEP1-202ENST00000570380 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 WDR87Q6ZQQ6 2873 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 ENPP3O14638 875 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 DGKIO75912 1065 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 GGPS1O95749 300 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 CHRNA1P02708 482 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 ATF7P17544 494 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 RBM10P98175 930 aaKnown RBP12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 CDC37Q16543 378 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 RRP12Q5JTH9 1297 aaKnown RBP12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 MCF2L2Q86YR7 1114 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 TOMM22Q9NS69 142 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 DDX19BQ9UMR2 479 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 PCDHGC5Q9Y5F6 944 aa12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 MRPL42Q9Y6G3 142 aaKnown RBP12.21□□□□□ -0.45
CTDNEP1-202ENST00000570380 LGALS2P05162 132 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms