RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 ZBBXA8MT70 800 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 CDC45O75419 566 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 LGALS2P05162 132 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 ADAM17P78536 824 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 FUT2Q10981 343 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 COL9A3Q14050 684 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-212ENST00000566121 PPP1R18Q6NYC8 613 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 APOA5Q6Q788 366 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 FAM43BQ6ZT52 329 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-212ENST00000566121 HERC6Q8IVU3 1022 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 MYL10Q9BUA6 226 aa17.45■□□□□ 0.38
CMTM3-212ENST00000566121 NBNO60934 754 aa17.44■□□□□ 0.38
CMTM3-212ENST00000566121 FOSP01100 380 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-212ENST00000566121 ZNF286BP0CG31 522 aa17.44■□□□□ 0.38
CMTM3-212ENST00000566121 MKRN4PQ13434 485 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-212ENST00000566121 ADGRE1Q14246 886 aa17.44■□□□□ 0.38
CMTM3-212ENST00000566121 ATXN2LQ8WWM7 1075 aaKnown RBP17.44■□□□□ 0.38
CMTM3-212ENST00000566121 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.38
CMTM3-212ENST00000566121 ALG1Q9BT22 464 aa17.44■□□□□ 0.38
CMTM3-212ENST00000566121 COL25A1Q9BXS0 654 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-212ENST00000566121 FTOQ9C0B1 505 aaKnown RBP eCLIP17.44■□□□□ 0.38
CMTM3-212ENST00000566121 PRDM12Q9H4Q4 367 aa17.44■□□□□ 0.38
CMTM3-212ENST00000566121 UBIAD1Q9Y5Z9 338 aa17.44■□□□□ 0.38
CMTM3-212ENST00000566121 SCN5AQ14524 2016 aa17.43■□□□□ 0.38
CMTM3-212ENST00000566121 C17orf102A2RUQ5 167 aa17.43■□□□□ 0.38
CMTM3-212ENST00000566121 NOP56O00567 594 aaKnown RBP17.43■□□□□ 0.38
CMTM3-212ENST00000566121 PPP2R2DQ66LE6 453 aa17.43■□□□□ 0.38
CMTM3-212ENST00000566121 CYFIP1Q7L576 1253 aa17.43■□□□□ 0.38
CMTM3-212ENST00000566121 RNPEPQ9H4A4 650 aa17.43■□□□□ 0.38
CMTM3-212ENST00000566121 ZNF215Q9UL58 517 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-212ENST00000566121 RPLP2P05387 115 aaKnown RBP17.42■□□□□ 0.38
CMTM3-212ENST00000566121 KCNA2P16389 499 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 ITGB5P18084 799 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 KCNJ6P48051 423 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 RABGGTBP53611 331 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 WDR5P61964 334 aaKnown RBP17.42■□□□□ 0.38
CMTM3-212ENST00000566121 IKBKEQ14164 716 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 HIC1Q14526 733 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 FAM26DQ5JW98 314 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 ZNF618Q5T7W0 954 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 BCAS3Q9H6U6 928 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 EHMT1Q9H9B1 1298 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 RIC8AQ9NPQ8 531 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 JADE2Q9NQC1 790 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 RTEL1Q9NZ71 1219 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 LMCD1Q9NZU5 365 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 NRCAMQ92823 1304 aa17.42■□□□□ 0.38
CMTM3-212ENST00000566121 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 SPDYE3A6NKU9 549 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 ZBTB43O43298 467 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 LGR5O75473 907 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 GJB5O95377 273 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 SMIM10L2AP0DMW4 78 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 SMIM10L2BP0DMW5 78 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 MBTPS1Q14703 1052 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 MCTP2Q6DN12 878 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 PPP1R13LQ8WUF5 828 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 SEPT1Q8WYJ6 367 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 ATP6V0A1Q93050 837 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 RAD9AQ99638 391 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 PCDHA6Q9UN73 950 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 PCDHA8Q9Y5H6 950 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 XIRP2A4UGR9 3374 aa17.41■□□□□ 0.38
CMTM3-212ENST00000566121 RSPH10B2B2RC85 870 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 CA3P07451 260 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 RSPH10BP0C881 870 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 ZNF200P98182 395 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-212ENST00000566121 TAP1Q03518 808 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 RTN1Q16799 776 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 PLEKHG4Q58EX7 1191 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 TJAP1Q5JTD0 557 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 CMTR1Q8N1G2 835 aaKnown RBP17.4■□□□□ 0.38
CMTM3-212ENST00000566121 USP38Q8NB14 1042 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 TNPO1Q92973 898 aaKnown RBP17.4■□□□□ 0.38
CMTM3-212ENST00000566121 WNT8BQ93098 351 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 LRRC2Q9BYS8 371 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 FAM217BQ9NTX9 383 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-212ENST00000566121 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 BRPF3Q9ULD4 1205 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 CNTNAP5Q8WYK1 1306 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 NID2Q14112 1375 aa17.4■□□□□ 0.38
CMTM3-212ENST00000566121 ATP9AO75110 1047 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 MYOGP15173 224 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 RXRAP19793 462 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 HSPA4P34932 840 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 EVCP57679 992 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 CHMP4BP1P59074 171 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 AP3B2Q13367 1082 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 MTMR1Q13613 665 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 TAF2Q6P1X5 1199 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 NIPA1Q7RTP0 329 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 ERAP1Q9NZ08 941 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 REV3LO60673 3130 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 NFASCO94856 1347 aa17.39■□□□□ 0.37
CMTM3-212ENST00000566121 GBF1Q92538 1859 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms