RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 PPP2R5AQ15172 486 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 ATP2B3Q16720 1220 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 INF2Q27J81 1249 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 C1orf141Q5JVX7 400 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 ACBD5Q5T8D3 534 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 CREB3L3Q68CJ9 461 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 CDCA2Q69YH5 1023 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 UNC5DQ6UXZ4 953 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 PACS1Q6VY07 963 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 RBM43Q6ZSC3 357 aaKnown RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 RASGRP2Q7LDG7 609 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 DAAM2Q86T65 1068 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 ANKMY2Q8IV38 441 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 RGL4Q8IZJ4 473 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 AGGF1Q8N302 714 aaeCLIP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 LILRB2Q8N423 598 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 FBXL16Q8N461 479 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 GIMAP8Q8ND71 665 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 WDR66Q8TBY9 1149 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 TTC9Q92623 222 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 KCNN1Q92952 543 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 NSUN5Q96P11 429 aaKnown RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 BAG1Q99933 345 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 METTL22Q9BUU2 404 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 GPR108Q9NPR9 543 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 C9orf78Q9NZ63 289 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 PCSK1NQ9UHG2 260 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 GTF3C4Q9UKN8 822 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 PYCARDQ9ULZ3 195 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 CNPY2Q9Y2B0 182 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 MAP3K2Q9Y2U5 619 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 RRP15Q9Y3B9 282 aaKnown RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 SLC30A1Q9Y6M5 507 aa5.8□□□□□ -1.48
CAPN3-214ENST00000565274 SIPA1L3O60292 1781 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-214ENST00000565274 LOC102724428A0A0B4J2F2 783 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SOWAHDA6NJG2 315 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SMTNL1A8MU46 457 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L15C9J2P7 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L10C9JJH3 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L13C9JLJ4 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L12C9JPN9 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L11C9JVI0 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L21D6R901 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L18D6R9N7 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L22D6RA61 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L17D6RBQ6 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L19D6RCP7 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L20D6RJB6 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SCAMP3O14828 347 aaKnown RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 OPLAHO14841 1288 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SPTLC2O15270 562 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 FIBPO43427 364 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 XYLBO75191 536 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 GHRHP01286 108 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 IGKV5-2P06315 115 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 MYL3P08590 195 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 HARSP12081 509 aaKnown RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 TNNT1P13805 278 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 GLULP15104 373 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 GLB1P16278 677 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 ZNF24P17028 368 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 EIF2S2P20042 333 aaKnown RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 RFX5P48382 616 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 COPAP53621 1224 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 NRLP54845 237 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SIK1P57059 783 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 UBASH3AP57075 661 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SNX16P57768 344 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 IRX1P78414 480 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 PTH1RQ03431 593 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 GABPB1Q06547 395 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 USP17L24Q0WX57 530 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 ST3GAL1Q11201 340 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 GCKRQ14397 625 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SLC4A8Q2Y0W8 1093 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 ATL3Q6DD88 541 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 MCTP2Q6DN12 878 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 ERAP2Q6P179 960 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 ZNF790Q6PG37 636 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 CWC27Q6UX04 472 aaKnown RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 ANKRD18AQ8IVF6 992 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 NKAIN3Q8N8D7 197 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 FAM200AQ8TCP9 573 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 ANKRD24Q8TF21 1146 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 HDAC7Q8WUI4 952 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 EAF2Q96CJ1 260 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 PGBD4Q96DM1 585 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 GMLQ99445 158 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 LLPHQ9BRT6 129 aaKnown RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SLC39A3Q9BRY0 314 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 SCAND2PQ9GZW5 306 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 MRPL18Q9H0U6 180 aaKnown RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 TMX1Q9H3N1 280 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 DEF6Q9H4E7 631 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 GOLGA2P5Q9HBQ8 144 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 NLRP2Q9NX02 1062 aa5.79□□□□□ -1.48
CAPN3-214ENST00000565274 TLR7Q9NYK1 1049 aaKnown RBP5.79□□□□□ -1.48
CAPN3-214ENST00000565274 TPCN1Q9ULQ1 816 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms