RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 RSBN1LQ6PCB5 846 aaPredicted RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 ELMOD1Q8N336 334 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 C2orf69Q8N8R5 385 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 MYRIPQ8NFW9 859 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 MMTAG2Q9BU76 263 aaKnown RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 CAPS2Q9BXY5 557 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 CAPN7Q9Y6W3 813 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 USP17L3A6NCW0 530 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 USP17L4A6NCW7 530 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 hCG_1984214I3L0E3 225 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 PPP1R12AO14974 1030 aaPredicted RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 PPARGP37231 505 aaPredicted RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ADCY1Q08828 1119 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 SURF1Q15526 300 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 USP17L1Q7RTZ2 530 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ZNF713Q8N859 430 aaPredicted RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 CXorf38Q8TB03 319 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 P2RX5Q93086 422 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 NUP153P49790 1475 aaKnown RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 SCRN1Q12765 414 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 DHTKD1Q96HY7 919 aaPredicted RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 SPZ1Q9BXG8 430 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 FOXP1Q9H334 677 aaPredicted RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 EPS15L1Q9UBC2 864 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 KCNQ4P56696 695 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 CYP4F22Q6NT55 531 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 RWDD4Q6NW29 188 aaKnown RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 TMTC3Q6ZXV5 915 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 FAM160B2Q86V87 743 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 YEATS2Q9ULM3 1422 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ECEL1O95672 775 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ANKRD20A4Q4UJ75 823 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ANKRD20A8PQ5CZ79 823 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ANKRD20A2Q5SQ80 823 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ANKRD20A1Q5TYW2 823 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 CATSPER4Q7RTX7 472 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 CFAP36Q96G28 342 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 SPATA17Q96L03 361 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 SSH2Q76I76 1423 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ZNF18P17022 549 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 CASP14P31944 242 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 RECQLP46063 649 aaPredicted RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 TMED2Q15363 201 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 FASTKD5Q7L8L6 764 aaKnown RBP12.16□□□□□ -0.46
RPAP1-204ENST00000562303 PCGF5Q86SE9 256 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 THEM5Q8N1Q8 247 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 STAG1Q8WVM7 1258 aa12.16□□□□□ -0.46
RPAP1-204ENST00000562303 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 DPYSL4O14531 572 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 GFPT2O94808 682 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 ATP6V1E1P36543 226 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 RC3H1Q5TC82 1133 aaKnown RBP12.15□□□□□ -0.46
RPAP1-204ENST00000562303 OR6B3Q8NGW1 331 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 MSTO1Q9BUK6 570 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 TTI1O43156 1089 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 LLGL1Q15334 1064 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 CDC37Q16543 378 aaPredicted RBP12.15□□□□□ -0.46
RPAP1-204ENST00000562303 GSDMAQ96QA5 445 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 GCNT4Q9P109 453 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 MTMR6Q9Y217 621 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 IFNAR2P48551 515 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 FOXD4Q12950 439 aaPredicted RBP12.15□□□□□ -0.46
RPAP1-204ENST00000562303 UBE2SQ16763 222 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 LRRD1A4D1F6 860 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 TOM1L1O75674 476 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 HSPA8P11142 646 aaKnown RBP12.15□□□□□ -0.46
RPAP1-204ENST00000562303 PARVGQ9HBI0 331 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 INTS9Q9NV88 658 aaKnown RBP12.15□□□□□ -0.46
RPAP1-204ENST00000562303 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.46
RPAP1-204ENST00000562303 WDR62O43379 1518 aa12.15□□□□□ -0.47
RPAP1-204ENST00000562303 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 USP17L2Q6R6M4 530 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 DEPDC1BQ8WUY9 529 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 CCDC124Q96CT7 223 aaKnown RBP12.14□□□□□ -0.47
RPAP1-204ENST00000562303 ZNF341Q9BYN7 854 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 XAB2Q9HCS7 855 aaKnown RBP12.14□□□□□ -0.47
RPAP1-204ENST00000562303 TMEM63CQ9P1W3 806 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
RPAP1-204ENST00000562303 MAN2A1Q16706 1144 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 ZMYM1Q5SVZ6 1142 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 TTLL6Q8N841 843 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 N4BP2L2Q92802 583 aaPredicted RBP12.14□□□□□ -0.47
RPAP1-204ENST00000562303 SUN1O94901 812 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 MT-ND3P03897 115 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 NPR1P16066 1061 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 MXI1P50539 228 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 SNAP25P60880 206 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 ANGPTL8Q6UXH0 198 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 FBXO18Q8NFZ0 1043 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms