RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 UNC45AQ9H3U1 944 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 RRAGCQ9HB90 399 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 BTBD7Q9P203 1132 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 WRAP73Q9P2S5 460 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
SNRPA1-211ENST00000560433 GOLGA6L6A8MZA4 724 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 GRIN3BO60391 1043 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 ATP9AO75110 1047 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 SPATA1Q5VX52 437 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 ADSSL1Q8N142 457 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 HOXC10Q9NYD6 342 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 ADAMTS5Q9UNA0 930 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 PTPRFP10586 1907 aa12.15□□□□□ -0.46
SNRPA1-211ENST00000560433 NKRFO15226 690 aaKnown RBP eCLIP12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 TEX33O43247 280 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 FSTL1Q12841 308 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 KCNB1Q14721 858 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 ARSHQ5FYA8 562 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 HAUS3Q68CZ6 603 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 GPBP1Q86WP2 473 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 DNAJC19Q96DA6 116 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 BHMT2Q9H2M3 363 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 PXMP2Q9NR77 195 aa12.15□□□□□ -0.47
SNRPA1-211ENST00000560433 KDM3AQ9Y4C1 1321 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 SLITRK3O94933 977 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 RPA1P27694 616 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 GJA5P36382 358 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 ITGB3BPQ13352 177 aaPredicted RBP12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 MTMR1Q13613 665 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 TKFCQ3LXA3 575 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 ERO1BQ86YB8 467 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 SLC5A5Q92911 643 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 PDCD2LQ9BRP1 358 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 TEX13BQ9BXU2 312 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 MAGEF1Q9HAY2 307 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 TELO2Q9Y4R8 837 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 RPTORQ8N122 1335 aa12.14□□□□□ -0.47
SNRPA1-211ENST00000560433 IQCA1LA6NCM1 817 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 CYP11B2P19099 503 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 CDC25BP30305 580 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 SLC12A3P55017 1021 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 CNTN2Q02246 1040 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 SP4Q02446 784 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 HYIQ5T013 277 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 ERMNQ8TAM6 284 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 RWDD2AQ9UIY3 292 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 RSPH10B2B2RC85 870 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 KRT18P05783 430 aaKnown RBP12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 MYL1P05976 194 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 RSPH10BP0C881 870 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 PPATQ06203 517 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 PCNX4Q63HM2 1172 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 ANKRD40Q6AI12 368 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 SRRTQ9BXP5 876 aaKnown RBP12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 VPS16Q9H269 839 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 PANK4Q9NVE7 773 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 CYP39A1Q9NYL5 469 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 DNM3Q9UQ16 869 aa12.13□□□□□ -0.47
SNRPA1-211ENST00000560433 A0A0G2JLL6 359 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 TMEM150BA6NC51 233 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 SPDYE5A6NIY4 337 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 ECM2O94769 699 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 COASYQ13057 564 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 APTXQ7Z2E3 356 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 PRRT2Q7Z6L0 340 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 NCAPG2Q86XI2 1143 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 LRRC8AQ8IWT6 810 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 TRIM47Q96LD4 638 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 HSD17B14Q9BPX1 270 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 ASCC2Q9H1I8 757 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 ACAD9Q9H845 621 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 TXNRD2Q9NNW7 524 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 BMP2KQ9NSY1 1161 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 DHX15O43143 795 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 NR3C2P08235 984 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 Q3C1V9 767 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 CDKAL1Q5VV42 579 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 MAEAQ7L5Y9 396 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 PNMA8AQ86V59 439 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 NELFCDQ8IXH7 590 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 ANKRD35Q8N283 1001 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 CCDC47Q96A33 483 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 RUSC1Q9BVN2 902 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 TEKT3Q9BXF9 490 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 AGO4Q9HCK5 861 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-211ENST00000560433 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms