RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 NDST4Q9H3R1 872 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.28□□□□□ -0.44
SPG11-217ENST00000559511 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 SIK3Q9Y2K2 1263 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 PCDHA2Q9Y5H9 948 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.44
SPG11-217ENST00000559511 A0A1W2PQJ5 194 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 SPDYE3A6NKU9 549 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 EGFRP00533 1210 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 CYP11B2P19099 503 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 SLC12A3P55017 1021 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 ZNF280AP59817 542 aaPredicted RBP12.27□□□□□ -0.45
SPG11-217ENST00000559511 MAP3K10Q02779 954 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 RAD51AP2Q09MP3 1159 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 MAN2A1Q16706 1144 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 TSR1Q2NL82 804 aaKnown RBP12.27□□□□□ -0.45
SPG11-217ENST00000559511 GPBP1Q86WP2 473 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 NHEJ1Q9H9Q4 299 aaPredicted RBP12.27□□□□□ -0.45
SPG11-217ENST00000559511 FAM53CQ9NYF3 392 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 MYO1AQ9UBC5 1043 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 CDC23Q9UJX2 597 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 SCAF8Q9UPN6 1271 aaKnown RBP12.27□□□□□ -0.45
SPG11-217ENST00000559511 CD2APQ9Y5K6 639 aa12.27□□□□□ -0.45
SPG11-217ENST00000559511 RBBP6Q7Z6E9 1792 aaKnown RBP12.27□□□□□ -0.45
SPG11-217ENST00000559511 ZSCAN20P17040 1043 aaPredicted RBP12.26□□□□□ -0.45
SPG11-217ENST00000559511 HOXA7P31268 230 aaPredicted RBP12.26□□□□□ -0.45
SPG11-217ENST00000559511 CAP2P40123 477 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 PRELPP51888 382 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 KIF4BQ2VIQ3 1234 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 ARSHQ5FYA8 562 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 CATSPER3Q86XQ3 398 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 CYP2W1Q8TAV3 490 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 ZSWIM4Q9H7M6 989 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 BMP2KQ9NSY1 1161 aaPredicted RBP12.26□□□□□ -0.45
SPG11-217ENST00000559511 GUCA1BQ9UMX6 200 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 ABCB11O95342 1321 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 MEIS1O00470 390 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 TBX3O15119 743 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 SLC26A4O43511 780 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 FGFR1OPO95684 399 aaKnown RBP12.26□□□□□ -0.45
SPG11-217ENST00000559511 FOSP01100 380 aaPredicted RBP12.26□□□□□ -0.45
SPG11-217ENST00000559511 SPATA31C1P0DKV0 1188 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 STAT2P52630 851 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 PSMC6P62333 389 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 RASSF7Q02833 373 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 NCAPH2Q6IBW4 605 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 FOXR2Q6PJQ5 311 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 SRGAP1Q7Z6B7 1085 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 NAPGQ99747 312 aaPredicted RBP12.26□□□□□ -0.45
SPG11-217ENST00000559511 TSG101Q99816 390 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 GOPCQ9HD26 462 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 FAM207AQ9NSI2 230 aaPredicted RBP12.26□□□□□ -0.45
SPG11-217ENST00000559511 PUF60Q9UHX1 559 aaKnown RBP12.26□□□□□ -0.45
SPG11-217ENST00000559511 LTBP3Q9NS15 1303 aa12.26□□□□□ -0.45
SPG11-217ENST00000559511 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 MSH4O15457 936 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 PLEKP08567 350 aaPredicted RBP12.25□□□□□ -0.45
SPG11-217ENST00000559511 RPS12P25398 132 aaKnown RBP12.25□□□□□ -0.45
SPG11-217ENST00000559511 CIITAP33076 1130 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 RASA3Q14644 834 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 FAM83BQ5T0W9 1011 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 HAUS3Q68CZ6 603 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 MCTP2Q6DN12 878 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 CCDC65Q8IXS2 484 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 GPR161Q8N6U8 529 aaKnown RBP12.25□□□□□ -0.45
SPG11-217ENST00000559511 SCFD1Q8WVM8 642 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 GOLGA1Q92805 767 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 ZNHIT6Q9NWK9 470 aaKnown RBP12.25□□□□□ -0.45
SPG11-217ENST00000559511 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 TRAF5O00463 557 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 ZRANB2O95218 330 aaKnown RBP eCLIP12.25□□□□□ -0.45
SPG11-217ENST00000559511 PTGER2P43116 358 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 CHMP4BP1P59074 171 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 CDK17Q00537 523 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 FKBP3Q00688 224 aaKnown RBP12.25□□□□□ -0.45
SPG11-217ENST00000559511 AMPD2Q01433 879 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 HERC4Q5GLZ8 1057 aaPredicted RBP12.25□□□□□ -0.45
SPG11-217ENST00000559511 NELFCDQ8IXH7 590 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 TBC1D5Q92609 795 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 RABGGTAQ92696 567 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 TEPSINQ96N21 525 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 GLIS2Q9BZE0 524 aaPredicted RBP12.25□□□□□ -0.45
SPG11-217ENST00000559511 HAUS4Q9H6D7 363 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 VAV3Q9UKW4 847 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 FHOD1Q9Y613 1164 aa12.25□□□□□ -0.45
SPG11-217ENST00000559511 POLR2AP24928 1970 aaKnown RBP12.24□□□□□ -0.45
SPG11-217ENST00000559511 EIF3CLB5ME19 914 aaKnown RBP12.24□□□□□ -0.45
SPG11-217ENST00000559511 ZNF263O14978 683 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 SBF1O95248 1867 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 RPA1P27694 616 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 CYLC1P35663 651 aaPredicted RBP12.24□□□□□ -0.45
SPG11-217ENST00000559511 GMPSP49915 693 aaPredicted RBP12.24□□□□□ -0.45
SPG11-217ENST00000559511 KRT83P78385 493 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 PABPC4Q13310 644 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms