RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ARNTLO00327 626 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 IGF2BP3O00425 579 aaKnown RBP eCLIP2.96□□□□□ -1.94
GABPB1-209ENST00000559100 FGF10O15520 208 aaPredicted RBP2.96□□□□□ -1.94
GABPB1-209ENST00000559100 EIF3JO75822 258 aaKnown RBP2.96□□□□□ -1.94
GABPB1-209ENST00000559100 COL6A2P12110 1019 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 PDE6AP16499 860 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 LSP1P33241 339 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 ADMP35318 185 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 GTF2A2P52657 109 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 IRF9Q00978 393 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 ADGRE1Q14246 886 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 HLTFQ14527 1009 aaKnown RBP eCLIP2.96□□□□□ -1.94
GABPB1-209ENST00000559100 ARHGAP44Q17R89 818 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 MINDY4Q4G0A6 757 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 ARHGAP29Q52LW3 1261 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 EFCAB2Q5VUJ9 269 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 MBLAC2Q68D91 279 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 NXNQ6DKJ4 435 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 RNF111Q6ZNA4 994 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 ARHGAP36Q6ZRI8 547 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 TTLL7Q6ZT98 887 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 C22orf34Q6ZV56 151 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 OVCH1Q7RTY7 1134 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 ZAR1Q86SH2 424 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 OSTM1Q86WC4 334 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 PTRH1Q86Y79 214 aaKnown RBP2.96□□□□□ -1.94
GABPB1-209ENST00000559100 CREG2Q8IUH2 290 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 USHBP1Q8N6Y0 703 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 MAGEB6Q8N7X4 407 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 CLRN3Q8NCR9 226 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 LINC00116Q8NCU8 138 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 TP53INP1Q96A56 240 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 FAXDC2Q96IV6 333 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 HSPA12BQ96MM6 686 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 MMP19Q99542 508 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 ORAI3Q9BRQ5 295 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 BOCQ9BWV1 1114 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 OSBPL1AQ9BXW6 950 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 RHOBTB2Q9BYZ6 727 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 C7orf69Q9H7B7 122 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 VTA1Q9NP79 307 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 GULP1Q9UBP9 304 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 RCAN3Q9UKA8 241 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 CBLCQ9ULV8 474 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 INVSQ9Y283 1065 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 ANKRD6Q9Y2G4 727 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 GIT1Q9Y2X7 761 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 PCDHA11Q9Y5I1 949 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 A0A1W2PQJ5 194 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 C7orf72A4D263 438 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 KLHL33A6NCF5 533 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 WTIPA6NIX2 430 aaPredicted RBP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 C22orf46C9J442 243 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 SCDO00767 359 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 PRPF3O43395 683 aaKnown RBP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 RFPL1O75677 317 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 DGKIO75912 1065 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 ABLIM3O94929 683 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 IFIT2P09913 472 aaKnown RBP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 SLC9A1P19634 815 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 FPR2P25090 351 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 CYP2C19P33261 490 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 MECP2P51608 486 aaKnown RBP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 KIF11P52732 1056 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 JAM2P57087 298 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 EGR3Q06889 387 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 TMEM132BQ14DG7 1078 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 PCBP2Q15366 365 aaKnown RBP eCLIP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 TESK1Q15569 626 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 GPR19Q15760 415 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 RTP2Q5QGT7 225 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 CXorf57Q6NSI4 855 aaKnown RBP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 LILRA6Q6PI73 481 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 CEP68Q76N32 757 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 DGKHQ86XP1 1220 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 TEX2Q8IWB9 1127 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 SMC5Q8IY18 1101 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 DZIP1LQ8IYY4 767 aaKnown RBP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 EFHBQ8N7U6 833 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 KIAA1958Q8N8K9 716 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 TGFBRAP1Q8WUH2 860 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 HSPBAP1Q96EW2 488 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 CAMKK2Q96RR4 588 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 PRDM11Q9NQV5 511 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 MARCH2Q9P0N8 246 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 SAP30BPQ9UHR5 308 aaKnown RBP2.95□□□□□ -1.94
GABPB1-209ENST00000559100 KCNG1Q9UIX4 513 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 FBXL7Q9UJT9 491 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 ZBTB21Q9ULJ3 1066 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 RAXQ9Y2V3 346 aa2.95□□□□□ -1.94
GABPB1-209ENST00000559100 H7BY64 318 aa2.94□□□□□ -1.94
GABPB1-209ENST00000559100 ZNF561-AS1K7EIQ3 104 aa2.94□□□□□ -1.94
GABPB1-209ENST00000559100 KDM1AO60341 852 aa2.94□□□□□ -1.94
GABPB1-209ENST00000559100 LDHAP00338 332 aaKnown RBP2.94□□□□□ -1.94
GABPB1-209ENST00000559100 LTFP02788 710 aa2.94□□□□□ -1.94
GABPB1-209ENST00000559100 FUCA1P04066 466 aa2.94□□□□□ -1.94
GABPB1-209ENST00000559100 CEACAM5P06731 702 aa2.94□□□□□ -1.94
GABPB1-209ENST00000559100 H2AFB1P0C5Y9 115 aa2.94□□□□□ -1.94
GABPB1-209ENST00000559100 H2AFB2P0C5Z0 115 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms